STRINGSTRING
ispE ispE AMV23583.1 AMV23583.1 AMV23664.1 AMV23664.1 AMV23754.1 AMV23754.1 AMV23769.1 AMV23769.1 AMV23802.1 AMV23802.1 rpsA_1 rpsA_1 priA priA AMV23940.1 AMV23940.1 AMV23969.1 AMV23969.1 AMV23986.1 AMV23986.1 AMV23990.1 AMV23990.1 bspRIM bspRIM haeIIIM haeIIIM AMV24236.1 AMV24236.1 ybiA_1 ybiA_1 ybiA_2 ybiA_2 glgC_2 glgC_2 AMV24539.1 AMV24539.1 AMV24560.1 AMV24560.1 rplK rplK ribF ribF AMV22885.1 AMV22885.1 AMV22899.1 AMV22899.1 AMV22978.1 AMV22978.1 rplA rplA gyrA_1 gyrA_1 ihfA ihfA cbiX cbiX AMV23147.1 AMV23147.1 smc_2 smc_2 rpmB rpmB AMV23319.1 AMV23319.1 glgC_1 glgC_1 acoA_1 acoA_1 AMV23409.1 AMV23409.1 bfmBAA bfmBAA thyX thyX rpsR_2 rpsR_2 AMV30329.1 AMV30329.1 gyrB_3 gyrB_3 AMV30205.1 AMV30205.1 AMV30195.1 AMV30195.1 AMV30157.1 AMV30157.1 gntK gntK nth nth queD queD AMV29956.1 AMV29956.1 AMV29926.1 AMV29926.1 rplT rplT AMV29899.1 AMV29899.1 draG_5 draG_5 lgrD_2 lgrD_2 clpS_2 clpS_2 rplY rplY AMV29641.1 AMV29641.1 rplI rplI smc_6 smc_6 AMV29568.1 AMV29568.1 AMV29525.1 AMV29525.1 AMV29481.1 AMV29481.1 draG_4 draG_4 AMV29432.1 AMV29432.1 dnaG_2 dnaG_2 AMV29358.1 AMV29358.1 AMV29216.1 AMV29216.1 AMV29037.1 AMV29037.1 rpmF rpmF rpsJ rpsJ rplD rplD rplW rplW rplB rplB rpsS rpsS rplV rplV rpsC rpsC rplP rplP rpmC rpmC rpsQ rpsQ rplN rplN rplX rplX rplE rplE rpsZ rpsZ rpsH rpsH rplF rplF rplR rplR rpsE rpsE rplO rplO rpsM rpsM rpsK rpsK rpsD_2 rpsD_2 rplQ rplQ hup hup rpsO rpsO AMV28817.1 AMV28817.1 draG_3 draG_3 AMV28648.1 AMV28648.1 yedK yedK AMV28528.1 AMV28528.1 paiB paiB miaA miaA AMV28431.1 AMV28431.1 AMV28409.1 AMV28409.1 AMV28390.1 AMV28390.1 AMV28382.1 AMV28382.1 rplC rplC AMV28353.1 AMV28353.1 rpsI rpsI rplM rplM hemA hemA recQ_2 recQ_2 prpB prpB nnr_1 nnr_1 AMV28101.1 AMV28101.1 AMV28023.1 AMV28023.1 ihfB ihfB dnaG_1 dnaG_1 AMV27823.1 AMV27823.1 xpkA xpkA AMV27725.1 AMV27725.1 rpsD_1 rpsD_1 rpsR_1 rpsR_1 dnaC dnaC AMV27677.1 AMV27677.1 AMV27525.1 AMV27525.1 AMV27412.1 AMV27412.1 AMV27332.1 AMV27332.1 gyrB_2 gyrB_2 AMV27259.1 AMV27259.1 murQ murQ nadD nadD draG_2 draG_2 AMV27141.1 AMV27141.1 rpmG rpmG nfo_2 nfo_2 AMV26993.1 AMV26993.1 shc_3 shc_3 recO recO rplU rplU AMV26809.1 AMV26809.1 shc_2 shc_2 eutC eutC gyrA_2 gyrA_2 gyrB_1 gyrB_1 ubiX ubiX rarA rarA AMV26556.1 AMV26556.1 lpxD lpxD kptA kptA AMV26468.1 AMV26468.1 AMV26459.1 AMV26459.1 recR recR ybaB ybaB AMV26286.1 AMV26286.1 AMV26275.1 AMV26275.1 AMV26203.1 AMV26203.1 AMV26092.1 AMV26092.1 mutS2 mutS2 AMV25978.1 AMV25978.1 pucG pucG rpsA_2 rpsA_2 rpmA rpmA rplJ rplJ rplL rplL rpsL rpsL rpsG rpsG AMV24670.1 AMV24670.1 rpmE2 rpmE2 clpS_1 clpS_1 rpsU_1 rpsU_1 rpsB rpsB rpsT rpsT draG_1 draG_1 AMV24995.1 AMV24995.1 selO selO AMV25119.1 AMV25119.1 AMV25160.1 AMV25160.1 AMV25261.1 AMV25261.1 recQ_1 recQ_1 eutB eutB AMV25404.1 AMV25404.1 shc_1 shc_1 AMV25424.1 AMV25424.1 AMV25490.1 AMV25490.1 rpsU_2 rpsU_2 acoA_2 acoA_2 rpsP rpsP rplS rplS topA topA acoA_3 acoA_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ispE4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (318 aa)
AMV23583.1Transmembrane exosortase. (357 aa)
AMV23664.1Hypothetical protein. (571 aa)
AMV23754.1Hypothetical protein. (726 aa)
AMV23769.1Hypothetical protein. (400 aa)
AMV23802.1CYTH domain protein. (186 aa)
rpsA_130S ribosomal protein S1. (620 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (775 aa)
AMV23940.1Eukaryotic DNA topoisomerase I, catalytic core. (347 aa)
AMV23969.1tRNAHis guanylyltransferase. (277 aa)
AMV23986.1Hypothetical protein. (88 aa)
AMV23990.1Hypothetical protein. (96 aa)
bspRIMModification methylase BspRI. (371 aa)
haeIIIMModification methylase HaeIII; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (397 aa)
AMV24236.1ATP-dependent DNA helicase RecQ. (160 aa)
ybiA_1Swarming motility protein YbiA. (91 aa)
ybiA_2Swarming motility protein YbiA. (43 aa)
glgC_2Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (430 aa)
AMV24539.1Nicotinic acid mononucleotide adenylyltransferase. (192 aa)
AMV24560.1C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (650 aa)
rplK50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (154 aa)
ribFRiboflavin biosynthesis protein RibF; Belongs to the ribF family. (316 aa)
AMV22885.1Hypothetical protein. (233 aa)
AMV22899.1ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. (99 aa)
AMV22978.1Prenyltransferase and squalene oxidase repeat protein. (331 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (220 aa)
gyrA_1DNA gyrase subunit A. (904 aa)
ihfAIntegration host factor subunit alpha; Belongs to the bacterial histone-like protein family. (115 aa)
cbiXSirohydrochlorin cobaltochelatase. (124 aa)
AMV23147.1Putative pterin-4-alpha-carbinolamine dehydratase. (115 aa)
smc_2Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1256 aa)
rpmB50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (86 aa)
AMV23319.1Hypothetical protein. (863 aa)
glgC_1Glucose-1-phosphate adenylyltransferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (430 aa)
acoA_1Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha. (659 aa)
AMV23409.1Hypothetical protein. (283 aa)
bfmBAA2-oxoisovalerate dehydrogenase subunit alpha. (376 aa)
thyXThymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (284 aa)
rpsR_230S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (80 aa)
AMV30329.1Hypothetical protein. (386 aa)
gyrB_3DNA gyrase subunit B. (823 aa)
AMV30205.1Hypothetical protein. (196 aa)
AMV30195.1Hypothetical protein. (388 aa)
AMV30157.1Hypothetical protein. (661 aa)
gntKThermoresistant gluconokinase. (162 aa)
nthEndonuclease III. (268 aa)
queD6-carboxy-5,6,7,8-tetrahydropterin synthase. (158 aa)
AMV29956.1Hypothetical protein. (468 aa)
AMV29926.1Calcineurin-like phosphoesterase. (282 aa)
rplT50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (125 aa)
AMV29899.1NLI interacting factor-like phosphatase. (145 aa)
draG_5ADP-ribosyl-[dinitrogen reductase] glycohydrolase. (309 aa)
lgrD_2Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family. (1340 aa)
clpS_2ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (110 aa)
rplY50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (198 aa)
AMV29641.130S ribosomal protein S6. (171 aa)
rplI50S ribosomal protein L9; Binds to the 23S rRNA. (190 aa)
smc_6Chromosome partition protein Smc. (518 aa)
AMV29568.1Soluble hydrogenase 42 kDa subunit. (378 aa)
AMV29525.1Hypothetical protein. (695 aa)
AMV29481.1Transmembrane exosortase. (297 aa)
draG_4ADP-ribosyl-[dinitrogen reductase] glycohydrolase. (286 aa)
AMV29432.1Hypothetical protein. (642 aa)
dnaG_2DNA primase. (384 aa)
AMV29358.1Hypothetical protein. (1035 aa)
AMV29216.1N(G),N(G)-dimethylarginine dimethylaminohydrolase. (280 aa)
AMV29037.1Hypothetical protein. (451 aa)
rpmF50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (64 aa)
rpsJ30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (110 aa)
rplD50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (249 aa)
rplW50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (121 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (292 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (94 aa)
rplV50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (132 aa)
rpsC30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (246 aa)
rplP50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (152 aa)
rpmC50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (146 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (118 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (121 aa)
rplX50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (113 aa)
rplE50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (190 aa)
rpsZ30S ribosomal protein S14 type Z. (86 aa)
rpsH30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (152 aa)
rplF50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (181 aa)
rplR50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (162 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (171 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (180 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (127 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (126 aa)
rpsD_230S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (212 aa)
rplQ50S ribosomal protein L17. (190 aa)
hupDNA-binding protein HU; Belongs to the bacterial histone-like protein family. (88 aa)
rpsO30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)
AMV28817.1Hypothetical protein. (272 aa)
draG_3ADP-ribosyl-[dinitrogen reductase] glycohydrolase. (311 aa)
AMV28648.1Endonuclease/Exonuclease/phosphatase family protein. (279 aa)
yedKPutative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. (227 aa)
AMV28528.1Hypothetical protein. (377 aa)
paiBProtease synthase and sporulation protein PAI 2. (208 aa)
miaAtRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (320 aa)
AMV28431.1Hypothetical protein. (481 aa)
AMV28409.1Hypothetical protein. (187 aa)
AMV28390.1Hypothetical protein. (167 aa)
AMV28382.1SET domain protein. (168 aa)
rplC50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (306 aa)
AMV28353.1Hypothetical protein. (182 aa)
rpsI30S ribosomal protein S9. (210 aa)
rplM50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (143 aa)
hemAGlutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (424 aa)
recQ_2ATP-dependent DNA helicase RecQ. (742 aa)
prpBMethylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. (293 aa)
nnr_1Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. (218 aa)
AMV28101.1ATP-binding region. (227 aa)
AMV28023.1Prenyltransferase and squalene oxidase repeat protein. (378 aa)
ihfBIntegration host factor subunit beta; Belongs to the bacterial histone-like protein family. (175 aa)
dnaG_1DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (640 aa)
AMV27823.1Hypothetical protein; Belongs to the UPF0145 family. (117 aa)
xpkAXylulose-5-phosphate phosphoketolase. (817 aa)
AMV27725.1Transmembrane exosortase. (286 aa)
rpsD_130S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (202 aa)
rpsR_130S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (88 aa)
dnaCReplicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (460 aa)
AMV27677.1EVE domain protein. (135 aa)
AMV27525.1Hypothetical protein. (111 aa)
AMV27412.1Hypothetical protein. (248 aa)
AMV27332.1Hypothetical protein. (182 aa)
gyrB_2DNA gyrase subunit B. (384 aa)
AMV27259.1Kua-ubiquitin conjugating enzyme hybrid localization domain protein. (389 aa)
murQN-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (624 aa)
nadDNicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (202 aa)
draG_2ADP-ribosyl-[dinitrogen reductase] glycohydrolase. (358 aa)
AMV27141.1DTW domain protein. (225 aa)
rpmG50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (56 aa)
nfo_2Endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (291 aa)
AMV26993.1SET domain protein. (124 aa)
shc_3Squalene--hopene cyclase. (620 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (357 aa)
rplU50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (108 aa)
AMV26809.1Hypothetical protein. (359 aa)
shc_2Squalene--hopene cyclase. (609 aa)
eutCEthanolamine ammonia-lyase light chain; Belongs to the EutC family. (265 aa)
gyrA_2DNA gyrase subunit A. (784 aa)
gyrB_1DNA gyrase subunit B. (648 aa)
ubiXPutative aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (208 aa)
rarAReplication-associated recombination protein A. (494 aa)
AMV26556.1Hypothetical protein. (461 aa)
lpxDUDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (344 aa)
kptARNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (181 aa)
AMV26468.1Hypothetical protein. (389 aa)
AMV26459.1Prenyltransferase and squalene oxidase repeat protein. (391 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (198 aa)
ybaBNucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (110 aa)
AMV26286.1RAMP superfamily protein. (214 aa)
AMV26275.1Hypothetical protein; Bifunctional DNA primase/polymerase, N-terminal. (699 aa)
AMV26203.1ADP-ribosylglycohydrolase. (314 aa)
AMV26092.1Sigma 54 modulation protein / S30EA ribosomal protein. (114 aa)
mutS2Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (677 aa)
AMV25978.1FAD binding domain of DNA photolyase. (526 aa)
pucGPurine catabolism protein PucG. (392 aa)
rpsA_230S ribosomal protein S1. (517 aa)
rpmA50S ribosomal protein L27. (89 aa)
rplJ50S ribosomal protein L10. (181 aa)
rplL50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (128 aa)
rpsL30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (158 aa)
AMV24670.16-pyruvoyl tetrahydropterin synthase. (163 aa)
rpmE250S ribosomal protein L31 type B. (92 aa)
clpS_1ATP-dependent Clp protease adapter protein ClpS; Belongs to the ClpS family. (108 aa)
rpsU_130S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (66 aa)
rpsB30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (299 aa)
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (95 aa)
draG_1ADP-ribosyl-[dinitrogen reductase] glycohydrolase. (322 aa)
AMV24995.1SET domain protein. (118 aa)
selOHypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (490 aa)
AMV25119.1Hypothetical protein. (985 aa)
AMV25160.1Hypothetical protein. (463 aa)
AMV25261.1Hypothetical protein. (366 aa)
recQ_1ATP-dependent DNA helicase RecQ. (94 aa)
eutBEthanolamine ammonia-lyase heavy chain. (465 aa)
AMV25404.1Hypothetical protein. (340 aa)
shc_1Squalene--hopene cyclase. (590 aa)
AMV25424.1Hypothetical protein. (686 aa)
AMV25490.1Hypothetical protein. (119 aa)
rpsU_230S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (72 aa)
acoA_2Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha. (332 aa)
rpsP30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (110 aa)
rplS50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (168 aa)
topADNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (986 aa)
acoA_3Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha. (321 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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