STRINGSTRING
kgd kgd bfmBAB bfmBAB acoA_1 acoA_1 tkt tkt acoB_1 acoB_1 acoB_2 acoB_2 dxs dxs
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kgdMultifunctional 2-oxoglutarate metabolism enzyme. (963 aa)
bfmBAB2-oxoisovalerate dehydrogenase subunit beta. (352 aa)
acoA_1Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha. (659 aa)
tktTransketolase; Belongs to the transketolase family. (683 aa)
acoB_1Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta. (350 aa)
acoB_2Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta. (368 aa)
dxs1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (637 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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