STRINGSTRING
glgX_3 glgX_3 glgX_1 glgX_1 amyS amyS glgB_1 glgB_1 glgX_2 glgX_2 glgB_2 glgB_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glgX_3Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family. (819 aa)
glgX_1Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family. (718 aa)
amySAlpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family. (493 aa)
glgB_11,4-alpha-glucan branching enzyme GlgB. (623 aa)
glgX_2Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family. (685 aa)
glgB_21,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (657 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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