(15 nodes) Acyl transferase/acyl hydrolase/lysophospholipase network (Gemmata sp. SHPL17)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fabD_1	Malonyl CoA-acyl carrier protein transacylase. (1114 aa)
	AMV23474.1	Patatin-like phospholipase. (409 aa)
	AMV24405.1	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. (2530 aa)
	AMV25944.1	Patatin-like phospholipase. (408 aa)
	AMV27444.1	Patatin-like phospholipase. (462 aa)
	AMV27483.1	Patatin-like phospholipase. (941 aa)
	rssA	NTE family protein RssA. (613 aa)
	AMV28112.1	Patatin-like phospholipase. (895 aa)
	AMV28184.1	Patatin-like phospholipase. (413 aa)
	AMV28396.1	Patatin-like phospholipase. (458 aa)
	AMV28682.1	Hypothetical protein. (870 aa)
	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase. (1450 aa)
	fenF	Malonyl CoA-acyl carrier protein transacylase. (1676 aa)
	fabD_2	Malonyl CoA-acyl carrier protein transacylase. (302 aa)
	AMV30431.1	Patatin-like phospholipase. (448 aa)

Your Current Organism:

Gemmata sp. SHPL17

NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMV24405.1	fabA	VT84_08410	VT84_31335	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase.	0.956
AMV24405.1	fabD_1	VT84_08410	VT84_08415	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.	Malonyl CoA-acyl carrier protein transacylase.	0.990
AMV24405.1	fabD_2	VT84_08410	VT84_33420	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.	Malonyl CoA-acyl carrier protein transacylase.	0.997
AMV24405.1	fenF	VT84_08410	VT84_31345	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.	Malonyl CoA-acyl carrier protein transacylase.	0.945
AMV24405.1	rssA	VT84_08410	VT84_25500	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.	NTE family protein RssA.	0.566
AMV28112.1	AMV28682.1	VT84_27145	VT84_30030	Patatin-like phospholipase.	Hypothetical protein.	0.404
AMV28682.1	AMV28112.1	VT84_30030	VT84_27145	Hypothetical protein.	Patatin-like phospholipase.	0.404
fabA	AMV24405.1	VT84_31335	VT84_08410	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase.	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.	0.956
fabA	fabD_1	VT84_31335	VT84_08415	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase.	Malonyl CoA-acyl carrier protein transacylase.	0.873
fabA	fabD_2	VT84_31335	VT84_33420	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase.	Malonyl CoA-acyl carrier protein transacylase.	0.887
fabA	fenF	VT84_31335	VT84_31345	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase.	Malonyl CoA-acyl carrier protein transacylase.	0.818
fabD_1	AMV24405.1	VT84_08415	VT84_08410	Malonyl CoA-acyl carrier protein transacylase.	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.	0.990
fabD_1	fabA	VT84_08415	VT84_31335	Malonyl CoA-acyl carrier protein transacylase.	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase.	0.873
fabD_1	fabD_2	VT84_08415	VT84_33420	Malonyl CoA-acyl carrier protein transacylase.	Malonyl CoA-acyl carrier protein transacylase.	0.911
fabD_1	fenF	VT84_08415	VT84_31345	Malonyl CoA-acyl carrier protein transacylase.	Malonyl CoA-acyl carrier protein transacylase.	0.920
fabD_2	AMV24405.1	VT84_33420	VT84_08410	Malonyl CoA-acyl carrier protein transacylase.	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.	0.997
fabD_2	fabA	VT84_33420	VT84_31335	Malonyl CoA-acyl carrier protein transacylase.	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase.	0.887
fabD_2	fabD_1	VT84_33420	VT84_08415	Malonyl CoA-acyl carrier protein transacylase.	Malonyl CoA-acyl carrier protein transacylase.	0.911
fabD_2	fenF	VT84_33420	VT84_31345	Malonyl CoA-acyl carrier protein transacylase.	Malonyl CoA-acyl carrier protein transacylase.	0.983
fenF	AMV24405.1	VT84_31345	VT84_08410	Malonyl CoA-acyl carrier protein transacylase.	Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.	0.945