(27 nodes) Xylose isomerase-like TIM barrel network (Gemmata sp. SHPL17)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMV27147.1	Xylose isomerase-like TIM barrel. (293 aa)
	AMV30355.1	Xylose isomerase-like TIM barrel. (302 aa)
	AMV29974.1	D-tagatose 3-epimerase. (270 aa)
	hyi_2	Hydroxypyruvate isomerase; Belongs to the hyi family. (295 aa)
	iolE_3	Inosose dehydratase. (312 aa)
	AMV28111.1	Xylose isomerase-like TIM barrel. (397 aa)
	AMV27776.1	Xylose isomerase-like TIM barrel. (390 aa)
	AMV27143.1	Xylose isomerase-like TIM barrel. (253 aa)
	AMV26895.1	Xylose isomerase-like TIM barrel. (312 aa)
	iolI_3	Inosose isomerase. (273 aa)
	iolI_2	Inosose isomerase. (274 aa)
	AMV26554.1	Xylose isomerase-like TIM barrel. (297 aa)
	ulaE_3	L-ribulose-5-phosphate 3-epimerase UlaE. (279 aa)
	AMV26516.1	Xylose isomerase-like TIM barrel. (286 aa)
	AMV24848.1	Xylose isomerase-like TIM barrel. (255 aa)
	hyi_1	Hydroxypyruvate isomerase. (308 aa)
	AMV24688.1	D-tagatose 3-epimerase. (270 aa)
	ulaE_2	L-ribulose-5-phosphate 3-epimerase UlaE. (292 aa)
	AMV24502.1	D-tagatose 3-epimerase. (286 aa)
	asbF	3-dehydroshikimate dehydratase. (285 aa)
	AMV24367.1	Xylose isomerase-like TIM barrel. (264 aa)
	iolE_2	Inosose dehydratase. (298 aa)
	iolI_1	Inosose isomerase. (302 aa)
	AMV23155.1	Xylose isomerase-like TIM barrel. (308 aa)
	nfo_1	Endonuclease 4. (294 aa)
	ulaE_1	L-ribulose-5-phosphate 3-epimerase UlaE. (280 aa)
	iolE_1	Inosose dehydratase. (330 aa)

Your Current Organism:

Gemmata sp. SHPL17

NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMV23155.1	ulaE_2	VT84_02005	VT84_09760	Xylose isomerase-like TIM barrel.	L-ribulose-5-phosphate 3-epimerase UlaE.	0.525
AMV24367.1	nfo_1	VT84_08220	VT84_01890	Xylose isomerase-like TIM barrel.	Endonuclease 4.	0.436
AMV24502.1	AMV28111.1	VT84_08900	VT84_27140	D-tagatose 3-epimerase.	Xylose isomerase-like TIM barrel.	0.415
AMV24502.1	AMV30355.1	VT84_08900	VT84_38540	D-tagatose 3-epimerase.	Xylose isomerase-like TIM barrel.	0.578
AMV24502.1	hyi_1	VT84_08900	VT84_10290	D-tagatose 3-epimerase.	Hydroxypyruvate isomerase.	0.527
AMV24502.1	iolE_1	VT84_08900	VT84_00105	D-tagatose 3-epimerase.	Inosose dehydratase.	0.449
AMV24502.1	iolI_1	VT84_08900	VT84_02440	D-tagatose 3-epimerase.	Inosose isomerase.	0.531
AMV24502.1	iolI_3	VT84_08900	VT84_20340	D-tagatose 3-epimerase.	Inosose isomerase.	0.681
AMV24502.1	nfo_1	VT84_08900	VT84_01890	D-tagatose 3-epimerase.	Endonuclease 4.	0.488
AMV24502.1	ulaE_2	VT84_08900	VT84_09760	D-tagatose 3-epimerase.	L-ribulose-5-phosphate 3-epimerase UlaE.	0.466
AMV24688.1	AMV30355.1	VT84_09855	VT84_38540	D-tagatose 3-epimerase.	Xylose isomerase-like TIM barrel.	0.453
AMV24688.1	hyi_2	VT84_09855	VT84_35155	D-tagatose 3-epimerase.	Hydroxypyruvate isomerase; Belongs to the hyi family.	0.488
AMV24688.1	iolI_2	VT84_09855	VT84_19690	D-tagatose 3-epimerase.	Inosose isomerase.	0.494
AMV24688.1	iolI_3	VT84_09855	VT84_20340	D-tagatose 3-epimerase.	Inosose isomerase.	0.550
AMV24688.1	nfo_1	VT84_09855	VT84_01890	D-tagatose 3-epimerase.	Endonuclease 4.	0.561
AMV24848.1	AMV28111.1	VT84_10655	VT84_27140	Xylose isomerase-like TIM barrel.	Xylose isomerase-like TIM barrel.	0.642
AMV24848.1	asbF	VT84_10655	VT84_08785	Xylose isomerase-like TIM barrel.	3-dehydroshikimate dehydratase.	0.615
AMV24848.1	hyi_2	VT84_10655	VT84_35155	Xylose isomerase-like TIM barrel.	Hydroxypyruvate isomerase; Belongs to the hyi family.	0.480
AMV24848.1	iolE_1	VT84_10655	VT84_00105	Xylose isomerase-like TIM barrel.	Inosose dehydratase.	0.628
AMV24848.1	nfo_1	VT84_10655	VT84_01890	Xylose isomerase-like TIM barrel.	Endonuclease 4.	0.449