STRINGSTRING
pabA pabA AMV22831.1 AMV22831.1 trpB trpB cysK_1 cysK_1 tkt tkt metH_2 metH_2 glnA_1 glnA_1 asnB asnB dmdA dmdA ilvH ilvH ilvG ilvG argA argA icd_1 icd_1 pyk pyk rpe rpe tal_1 tal_1 pfkA1 pfkA1 dapA_1 dapA_1 dat dat tdcB tdcB AMV24696.1 AMV24696.1 trpF trpF hisN_1 hisN_1 hisF hisF pgk pgk gap1 gap1 leuA_1 leuA_1 ypeA ypeA hisA_1 hisA_1 proB proB gltB_1 gltB_1 gltB_2 gltB_2 cysK1_1 cysK1_1 thrC_1 thrC_1 argJ argJ leuA_2 leuA_2 ilvD_2 ilvD_2 metK metK AMV26326.1 AMV26326.1 AMV26393.1 AMV26393.1 cfiB cfiB ilvC ilvC tal_2 tal_2 lysC lysC trpC trpC dapF dapF hisA_2 hisA_2 pspB_1 pspB_1 gltA gltA eno eno hisD hisD hisC hisC hisB hisB aroE aroE aroL aroL hisH1 hisH1 argF argF argD argD argB argB cysK_2 cysK_2 aroG aroG ilvA ilvA proA_2 proA_2 cysE_1 cysE_1 argG argG araD araD serA_1 serA_1 argH1 argH1 lysA lysA rpiA rpiA prs prs serA_2 serA_2 thrC_2 thrC_2 dapB dapB glyA glyA aroC aroC ltaE ltaE acnA acnA icd_2 icd_2 icd_3 icd_3 argC argC aroB aroB trpD trpD AMV28574.1 AMV28574.1 dapA_4 dapA_4 thrC_3 thrC_3 aspC aspC serA_3 serA_3 cbs cbs proC proC metC metC aroA aroA asd2 asd2 trpE trpE hisG hisG pheA pheA aroF_1 aroF_1 pgk/tpi pgk/tpi ilvB1 ilvB1 ywlF ywlF glnA_2 glnA_2 trpA trpA argE argE dapL dapL hom hom ilvE ilvE cysE_2 cysE_2 cysK1_2 cysK1_2 aroF_2 aroF_2 patA_2 patA_2 hisI hisI dmdB dmdB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pabAAminodeoxychorismate/anthranilate synthase component 2. (194 aa)
AMV22831.1Cofactor-independent phosphoglycerate mutase. (404 aa)
trpBTryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (403 aa)
cysK_1Cysteine synthase. (313 aa)
tktTransketolase; Belongs to the transketolase family. (683 aa)
metH_2Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (940 aa)
glnA_1Glutamine synthetase. (478 aa)
asnBAsparagine synthetase 1. (667 aa)
dmdA2,3-dimethylmalate dehydratase large subunit; Belongs to the aconitase/IPM isomerase family. (434 aa)
ilvHPutative acetolactate synthase small subunit. (168 aa)
ilvGAcetolactate synthase isozyme 2 large subunit; Belongs to the TPP enzyme family. (630 aa)
argAAmino-acid acetyltransferase; Belongs to the acetyltransferase family. (460 aa)
icd_1Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (404 aa)
pykPyruvate kinase; Belongs to the pyruvate kinase family. (479 aa)
rpeRibulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (222 aa)
tal_1Transaldolase. (234 aa)
pfkA16-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. (428 aa)
dapA_14-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (298 aa)
datD-alanine aminotransferase. (282 aa)
tdcBL-threonine dehydratase catabolic TdcB. (318 aa)
AMV24696.1Cyclohexadienyl dehydrogenase. (281 aa)
trpFN-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. (217 aa)
hisN_1Histidinol-phosphatase. (256 aa)
hisFImidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (260 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (401 aa)
gap1Glyceraldehyde-3-phosphate dehydrogenase 1; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (349 aa)
leuA_12-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (534 aa)
ypeAAcetyltransferase YpeA. (145 aa)
hisA_11-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Belongs to the HisA/HisF family. (252 aa)
proBGlutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (377 aa)
gltB_1Ferredoxin-dependent glutamate synthase 1. (1523 aa)
gltB_2Glutamate synthase [NADPH] small chain. (488 aa)
cysK1_1O-acetylserine sulfhydrylase. (313 aa)
thrC_1Threonine synthase. (407 aa)
argJArginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. (392 aa)
leuA_22-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (528 aa)
ilvD_2Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (560 aa)
metKS-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (421 aa)
AMV26326.1Asparagine synthetase B. (447 aa)
AMV26393.1Aspartate aminotransferase. (398 aa)
cfiB2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1157 aa)
ilvCKetol-acid reductoisomerase. (349 aa)
tal_2Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. (363 aa)
lysCAspartokinase. (630 aa)
trpCIndole-3-glycerol phosphate synthase; Belongs to the TrpC family. (260 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (286 aa)
hisA_21-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. (240 aa)
pspB_1Putative phosphoserine phosphatase 2. (238 aa)
gltACitrate synthase; Belongs to the citrate synthase family. (382 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (433 aa)
hisDHistidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (474 aa)
hisCHistidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (345 aa)
hisBImidazoleglycerol-phosphate dehydratase. (195 aa)
aroEShikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA); Belongs to the type-I 3-dehydroquinase family. (521 aa)
aroLShikimate kinase 2; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (180 aa)
hisH1Imidazole glycerol phosphate synthase subunit HisH 1; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (206 aa)
argFOrnithine carbamoyltransferase. (303 aa)
argDAcetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (403 aa)
argBAcetylglutamate kinase. (287 aa)
cysK_2Cysteine synthase. (314 aa)
aroGPhospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (373 aa)
ilvAL-threonine dehydratase biosynthetic IlvA; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (506 aa)
proA_2Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (429 aa)
cysE_1Serine acetyltransferase. (181 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (419 aa)
araDL-2-keto-3-deoxyarabonate dehydratase; Belongs to the DapA family. (305 aa)
serA_1D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (337 aa)
argH1Argininosuccinate lyase 1. (459 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (437 aa)
rpiARibose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (230 aa)
prsRibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (332 aa)
serA_2D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (539 aa)
thrC_2Threonine synthase. (464 aa)
dapB4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (263 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (419 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (385 aa)
ltaELow specificity L-threonine aldolase. (343 aa)
acnAAconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (981 aa)
icd_2Isocitrate dehydrogenase [NADP]. (340 aa)
icd_3Isocitrate dehydrogenase [NADP]. (234 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (337 aa)
aroB3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). (361 aa)
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (319 aa)
AMV28574.1Cofactor-independent phosphoglycerate mutase. (401 aa)
dapA_44-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (153 aa)
thrC_3Threonine synthase. (423 aa)
aspCAspartate aminotransferase. (378 aa)
serA_3D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (329 aa)
cbsPutative cystathionine beta-synthase. (449 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (276 aa)
metCCystathionine beta-lyase. (386 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (432 aa)
asd2Aspartate-semialdehyde dehydrogenase 2; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (338 aa)
trpEAnthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] (515 aa)
hisGATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. (291 aa)
pheAPrephenate dehydratase. (377 aa)
aroF_1Phospho-2-dehydro-3-deoxyheptonate aldolase. (343 aa)
pgk/tpiBifunctional PGK/TIM; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (254 aa)
ilvB1Acetolactate synthase large subunit IlvB1. (589 aa)
ywlFPutative sugar phosphate isomerase YwlF. (155 aa)
glnA_2Glutamine synthetase. (730 aa)
trpATryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (267 aa)
argEAcetylornithine deacetylase. (383 aa)
dapLLL-diaminopimelate aminotransferase. (416 aa)
homHomoserine dehydrogenase. (467 aa)
ilvEBranched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (288 aa)
cysE_2Serine acetyltransferase. (329 aa)
cysK1_2O-acetylserine sulfhydrylase. (330 aa)
aroF_2Phospho-2-dehydro-3-deoxyheptonate aldolase. (337 aa)
patA_2Putative N-acetyl-LL-diaminopimelate aminotransferase. (418 aa)
hisIphosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. (126 aa)
dmdB2,3-dimethylmalate dehydratase small subunit; Belongs to the LeuD family. (189 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
Server load: low (16%) [HD]