(14 nodes) Mixed, incl. Succinate metabolic process, and Nucleoside recognition network (Pirellula sp. SHSr6A)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMV32101.1	Hypothetical protein. (60 aa)
	nupX	Nucleoside permease NupX. (481 aa)
	AMV32103.1	Cadherin domain protein. (4962 aa)
	pqiA	Paraquat-inducible protein A. (155 aa)
	pqiB	Paraquat-inducible protein B. (504 aa)
	astD	N-succinylglutamate 5-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (481 aa)
	astB	N-succinylarginine dihydrolase. (449 aa)
	astA	Arginine N-succinyltransferase. (344 aa)
	AMV32435.1	Hypothetical protein. (117 aa)
	AMV32436.1	Hypothetical protein. (201 aa)
	AMV33280.1	Hypothetical protein. (96 aa)
	ttuB	Putative tartrate transporter. (412 aa)
	cpg2	Carboxypeptidase G2 precursor. (410 aa)
	AMV34944.1	Hypothetical protein. (473 aa)

Your Current Organism:

Pirellula sp. SHSr6A

NCBI taxonomy Id: 1632865
Other names: P. sp. SH-Sr6A, Pirellula sp. SH-Sr6A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMV32101.1	nupX	VN12_08260	VN12_08265	Hypothetical protein.	Nucleoside permease NupX.	0.459
AMV32103.1	nupX	VN12_08270	VN12_08265	Cadherin domain protein.	Nucleoside permease NupX.	0.519
AMV32103.1	pqiA	VN12_08270	VN12_08275	Cadherin domain protein.	Paraquat-inducible protein A.	0.462
AMV32103.1	pqiB	VN12_08270	VN12_08280	Cadherin domain protein.	Paraquat-inducible protein B.	0.462
AMV32435.1	AMV32436.1	VN12_09945	VN12_09950	Hypothetical protein.	Hypothetical protein.	0.881
AMV32436.1	AMV32435.1	VN12_09950	VN12_09945	Hypothetical protein.	Hypothetical protein.	0.881
AMV32436.1	AMV34944.1	VN12_09950	VN12_22650	Hypothetical protein.	Hypothetical protein.	0.494
AMV33280.1	ttuB	VN12_14225	VN12_14230	Hypothetical protein.	Putative tartrate transporter.	0.522
AMV34944.1	AMV32436.1	VN12_22650	VN12_09950	Hypothetical protein.	Hypothetical protein.	0.494
astA	astB	VN12_09640	VN12_08290	Arginine N-succinyltransferase.	N-succinylarginine dihydrolase.	0.998
astA	astD	VN12_09640	VN12_08285	Arginine N-succinyltransferase.	N-succinylglutamate 5-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.817
astA	cpg2	VN12_09640	VN12_20905	Arginine N-succinyltransferase.	Carboxypeptidase G2 precursor.	0.689
astB	astA	VN12_08290	VN12_09640	N-succinylarginine dihydrolase.	Arginine N-succinyltransferase.	0.998
astB	astD	VN12_08290	VN12_08285	N-succinylarginine dihydrolase.	N-succinylglutamate 5-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.958
astB	cpg2	VN12_08290	VN12_20905	N-succinylarginine dihydrolase.	Carboxypeptidase G2 precursor.	0.670
astB	pqiA	VN12_08290	VN12_08275	N-succinylarginine dihydrolase.	Paraquat-inducible protein A.	0.615
astB	pqiB	VN12_08290	VN12_08280	N-succinylarginine dihydrolase.	Paraquat-inducible protein B.	0.615
astD	astA	VN12_08285	VN12_09640	N-succinylglutamate 5-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Arginine N-succinyltransferase.	0.817
astD	astB	VN12_08285	VN12_08290	N-succinylglutamate 5-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	N-succinylarginine dihydrolase.	0.958
astD	cpg2	VN12_08285	VN12_20905	N-succinylglutamate 5-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Carboxypeptidase G2 precursor.	0.508