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| | AMV30493.1 | RNA polymerase sigma factor SigL; Belongs to the sigma-70 factor family. ECF subfamily. (199 aa) |
| | AMV30561.1 | RNA polymerase sigma factor. (213 aa) |
| | sigE_1 | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. (202 aa) |
| | acs | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (653 aa) |
| | cinA | Putative competence-damage inducible protein; Belongs to the CinA family. (448 aa) |
| | AMV30691.1 | DNA polymerase III subunit delta. (353 aa) |
| | carA | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. (389 aa) |
| | AMV30743.1 | AIR carboxylase. (266 aa) |
| | tmk_1 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (246 aa) |
| | pyrF | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. (294 aa) |
| | gmk | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. (198 aa) |
| | rpoZ | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (87 aa) |
| | coaBC_1 | Coenzyme A biosynthesis bifunctional protein CoaBC. (181 aa) |
| | coaBC_2 | Coenzyme A biosynthesis bifunctional protein CoaBC. (212 aa) |
| | tgt | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] (377 aa) |
| | queC | 7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (232 aa) |
| | dnaB_1 | Replicative DNA helicase. (435 aa) |
| | rpoE_1 | ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. (203 aa) |
| | pyrB | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (379 aa) |
| | purN | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. (198 aa) |
| | queE | 7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (234 aa) |
| | queF | NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. (120 aa) |
| | cnrH_1 | RNA polymerase sigma factor CnrH; Belongs to the sigma-70 factor family. ECF subfamily. (199 aa) |
| | pyrC | Dihydroorotase. (454 aa) |
| | AMV31227.1 | 6-pyruvoyl tetrahydropterin synthase. (170 aa) |
| | dnaC | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (509 aa) |
| | coaX | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. (287 aa) |
| | dnaE2 | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1068 aa) |
| | hrdB | RNA polymerase principal sigma factor HrdB; Belongs to the sigma-70 factor family. (554 aa) |
| | ltrA_1 | Group II intron-encoded protein LtrA. (459 aa) |
| | AMV31347.1 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. (419 aa) |
| | rfbC | dTDP-4-dehydrorhamnose 3,5-epimerase. (180 aa) |
| | AMV31503.1 | RNA polymerase sigma factor. (212 aa) |
| | cnrH_2 | RNA polymerase sigma factor CnrH; Belongs to the sigma-70 factor family. ECF subfamily. (293 aa) |
| | ltrA_2 | Group II intron-encoded protein LtrA. (459 aa) |
| | nrdB | Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (357 aa) |
| | AMV31584.1 | Zinc-binding domain of primase-helicase. (189 aa) |
| | sigE_2 | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. (202 aa) |
| | AMV31684.1 | Hypothetical protein. (889 aa) |
| | AMV31691.1 | Hypothetical protein. (194 aa) |
| | AMV31706.1 | Hypothetical protein. (605 aa) |
| | ltrA_3 | Group II intron-encoded protein LtrA. (459 aa) |
| | nrdJ | Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (990 aa) |
| | sigE_3 | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. (617 aa) |
| | pncC | Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family. (177 aa) |
| | purD | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. (438 aa) |
| | accD | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (278 aa) |
| | ackA_1 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (394 aa) |
| | rfaH | Transcription antitermination protein RfaH. (223 aa) |
| | ribF | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. (328 aa) |
| | purF | Amidophosphoribosyltransferase precursor; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (529 aa) |
| | rho | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (525 aa) |
| | rnk | Regulator of nucleoside diphosphate kinase. (126 aa) |
| | udk | Uridine kinase; Belongs to the uridine kinase family. (211 aa) |
| | AMV32157.1 | RNA polymerase sigma factor. (149 aa) |
| | ltrA_4 | Group II intron-encoded protein LtrA. (459 aa) |
| | ltrA_5 | Group II intron-encoded protein LtrA. (459 aa) |
| | queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (352 aa) |
| | nadC | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. (311 aa) |
| | disA | DNA integrity scanning protein DisA. (314 aa) |
| | sigV | RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa) |
| | AMV32426.1 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (173 aa) |
| | dinB | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (399 aa) |
| | pduW | Putative propionate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (396 aa) |
| | nusB | Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (156 aa) |
| | rpoA_1 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (327 aa) |
| | AMV32563.1 | Zinc-binding domain of primase-helicase. (348 aa) |
| | AMV32564.1 | Hypothetical protein. (629 aa) |
| | ltrA_6 | Group II intron-encoded protein LtrA. (459 aa) |
| | purA | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (429 aa) |
| | rho-2 | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (441 aa) |
| | AMV32623.1 | Hypothetical protein. (695 aa) |
| | AMV32629.1 | Hypothetical protein. (695 aa) |
| | AMV32635.1 | Hypothetical protein. (695 aa) |
| | ltrA_7 | Group II intron-encoded protein LtrA. (459 aa) |
| | pyrD | Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. (333 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (762 aa) |
| | carB | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. (1081 aa) |
| | purH | Bifunctional purine biosynthesis protein PurH. (540 aa) |
| | ltrA_8 | Group II intron-encoded protein LtrA. (459 aa) |
| | dnaB_3 | Replicative DNA helicase. (445 aa) |
| | tuaD | UDP-glucose 6-dehydrogenase TuaD; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (451 aa) |
| | cyaA | Adenylate cyclase 1. (659 aa) |
| | ylaC | RNA polymerase sigma factor YlaC. (90 aa) |
| | sigA_1 | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (553 aa) |
| | serS | Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (425 aa) |
| | AMV32968.1 | RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (182 aa) |
| | pyrK | Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit. (297 aa) |
| | nadB | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (551 aa) |
| | nusA | Hypothetical protein; Participates in both transcription termination and antitermination. (451 aa) |
| | sigW_1 | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. (192 aa) |
| | dcd | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. (211 aa) |
| | AMV33103.1 | DNA polymerase IV. (602 aa) |
| | ndk | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (203 aa) |
| | AMV33121.1 | Hypothetical protein. (241 aa) |
| | purL_1 | Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] (979 aa) |
| | ackA_2 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (392 aa) |
| | sigA_2 | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (520 aa) |
| | AMV33200.1 | RNA polymerase sigma factor SigZ. (191 aa) |
| | rpoE_2 | ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. (206 aa) |
| | fliI | Flagellum-specific ATP synthase. (464 aa) |
| | pyrE | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (190 aa) |
| | sigE_4 | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa) |
| | rpoD | RNA polymerase sigma factor RpoD; Belongs to the sigma-70 factor family. (362 aa) |
| | AMV33317.1 | RNA polymerase sigma factor SigL. (207 aa) |
| | AMV33393.1 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. (225 aa) |
| | kpsU | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (251 aa) |
| | AMV33429.1 | RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (243 aa) |
| | queG | Epoxyqueuosine reductase. (377 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (492 aa) |
| | AMV33504.1 | Selenocysteine synthase. (478 aa) |
| | accC | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (451 aa) |
| | rpoE_3 | ECF RNA polymerase sigma-E factor. (209 aa) |
| | dnaN_1 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (370 aa) |
| | AMV33723.1 | ECF sigma factor. (217 aa) |
| | rpoE_4 | ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. (210 aa) |
| | purM | Phosphoribosylformylglycinamidine cyclo-ligase. (353 aa) |
| | AMV33831.1 | Hypothetical protein; Belongs to the UPF0301 (AlgH) family. (168 aa) |
| | AMV33833.1 | Hypothetical protein. (434 aa) |
| | rpoE_5 | ECF RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (218 aa) |
| | tdk | Thymidine kinase. (203 aa) |
| | polX | DNA polymerase/3'-5' exonuclease PolX. (576 aa) |
| | nadD | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (214 aa) |
| | prs | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (320 aa) |
| | glmU | Bifunctional protein GlmU. (253 aa) |
| | sigW_2 | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. (206 aa) |
| | sigA_3 | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (307 aa) |
| | cmk | Cytidylate kinase. (242 aa) |
| | cnrH_3 | RNA polymerase sigma factor CnrH; Belongs to the sigma-70 factor family. (226 aa) |
| | rpoC | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1446 aa) |
| | rpoB | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1239 aa) |
| | AMV34097.1 | Hypothetical protein. (695 aa) |
| | coaD | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (169 aa) |
| | ppnK | Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. (294 aa) |
| | pyrG | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (557 aa) |
| | tmk_2 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (202 aa) |
| | purL_2 | Phosphoribosylformylglycinamidine synthase. (262 aa) |
| | accA | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (335 aa) |
| | nusG | Hypothetical protein; Participates in transcription elongation, termination and antitermination. (178 aa) |
| | AMV34254.1 | RNA polymerase sigma factor. (202 aa) |
| | nadA | Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (376 aa) |
| | fliA | RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (260 aa) |
| | ltrA_9 | Group II intron-encoded protein LtrA. (459 aa) |
| | AMV34353.1 | Hypothetical protein. (72 aa) |
| | thyX | Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (237 aa) |
| | dnaB_4 | Replicative DNA helicase. (435 aa) |
| | thyA | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (265 aa) |
| | AMV34450.1 | Hypothetical protein. (550 aa) |
| | AMV34452.1 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (211 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (189 aa) |
| | sigW_3 | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. (207 aa) |
| | greA | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (158 aa) |
| | AMV34537.1 | RNA polymerase sigma factor SigX; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa) |
| | dnaE | DNA polymerase III subunit alpha. (1193 aa) |
| | atpC | ATP synthase epsilon chain, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. (131 aa) |
| | atpD | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (484 aa) |
| | atpG | ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (305 aa) |
| | atpA | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (501 aa) |
| | atpH | ATP synthase subunit delta, sodium ion specific; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (207 aa) |
| | atpF | ATP synthase subunit b, sodium ion specific; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (207 aa) |
| | atpE | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (99 aa) |
| | atpB | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (443 aa) |
| | AMV34729.1 | Hypothetical protein. (521 aa) |
| | folD | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (292 aa) |
| | pyrH | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (261 aa) |
| | purU | Formyltetrahydrofolate deformylase. (287 aa) |
| | cnrH_4 | RNA polymerase sigma factor CnrH; Belongs to the sigma-70 factor family. ECF subfamily. (214 aa) |
| | stkP_5 | Serine/threonine-protein kinase StkP. (1260 aa) |
| | purB | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (459 aa) |
| | dnaX_1 | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (668 aa) |
| | purC | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. (292 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (656 aa) |
| | sigA_4 | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (543 aa) |
| | queD | 6-carboxy-5,6,7,8-tetrahydropterin synthase. (159 aa) |
| | rpoN2 | RNA polymerase sigma-54 factor 2. (496 aa) |
| | hpt | Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (177 aa) |
| | AMV35036.1 | Hypothetical protein; Belongs to the UPF0301 (AlgH) family. (201 aa) |
| | rpoE_6 | ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa) |
| | rpoA_3 | DNA-directed RNA polymerase subunit alpha. (87 aa) |
| | guaA | GMP synthase; Catalyzes the synthesis of GMP from XMP. (543 aa) |
| | sigW_4 | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa) |
| | sigW_5 | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. (241 aa) |
| | polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (970 aa) |
| | dnaX_2 | DNA polymerase III subunit tau. (332 aa) |
| | apt | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (179 aa) |
| | purK | N5-carboxyaminoimidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (387 aa) |
| | purE | N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (173 aa) |
| | AMV35223.1 | Hypothetical protein; Bifunctional DNA primase/polymerase, N-terminal. (756 aa) |
| | ltrA_10 | Group II intron-encoded protein LtrA. (459 aa) |
| | AMV35287.1 | Hypothetical protein; Belongs to the sigma-70 factor family. (258 aa) |
| | AMV35295.1 | Hypothetical protein. (787 aa) |
| | ltrA_11 | Group II intron-encoded protein LtrA. (459 aa) |
| | ltrA_12 | Group II intron-encoded protein LtrA. (459 aa) |
| | upp | Uracil phosphoribosyltransferase; Belongs to the UPRTase family. (209 aa) |
| | sigM | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa) |
| | AMV35561.1 | ECF sigma factor. (196 aa) |
| | AMV35672.1 | ECF sigma factor. (200 aa) |
| | dnaN_2 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (361 aa) |
| | dnaB_5 | Replicative DNA helicase. (442 aa) |
| | coaE | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (233 aa) |
