STRINGSTRING
cfiB cfiB nifJ nifJ poxB poxB ldh ldh ppdK ppdK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cfiB2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1152 aa)
nifJPyruvate-flavodoxin oxidoreductase. (1192 aa)
poxBPyruvate dehydrogenase; Belongs to the TPP enzyme family. (576 aa)
ldhL-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (350 aa)
ppdKPyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (887 aa)
Your Current Organism:
Planctomyces sp. SHPL62
NCBI taxonomy Id: 1636152
Other names: P. sp. SH-PL62, Planctomyces sp. SH-PL62
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