STRINGSTRING
AMV36706.1 AMV36706.1 recO recO corC_2 corC_2 ybeY ybeY AMV36714.1 AMV36714.1 ybeZ ybeZ cdsA cdsA AMV37439.1 AMV37439.1 dagK dagK egsA_1 egsA_1 AMV38860.1 AMV38860.1 AMV38861.1 AMV38861.1 egsA_2 egsA_2 plsC_1 plsC_1 gpsA gpsA der der rluB rluB cmk cmk plsC_2 plsC_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMV36706.1Hypothetical protein. (202 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (247 aa)
corC_2Magnesium and cobalt efflux protein CorC. (430 aa)
ybeYEndoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (176 aa)
AMV36714.17TM receptor with intracellular HD hydrolase. (746 aa)
ybeZPhoH-like protein. (338 aa)
cdsAPhosphatidate cytidylyltransferase. (303 aa)
AMV37439.1Hypothetical protein; YTV. (280 aa)
dagKDiacylglycerol kinase. (350 aa)
egsA_1Glycerol-1-phosphate dehydrogenase [NAD(P)+]. (362 aa)
AMV38860.12-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase. (232 aa)
AMV38861.1Hypothetical protein. (174 aa)
egsA_2Glycerol-1-phosphate dehydrogenase [NAD(P)+]. (461 aa)
plsC_11-acyl-sn-glycerol-3-phosphate acyltransferase. (228 aa)
gpsAGlycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (332 aa)
derGTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (507 aa)
rluBRibosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. (661 aa)
cmkCytidylate kinase. (217 aa)
plsC_21-acyl-sn-glycerol-3-phosphate acyltransferase. (251 aa)
Your Current Organism:
Planctomyces sp. SHPL62
NCBI taxonomy Id: 1636152
Other names: P. sp. SH-PL62, Planctomyces sp. SH-PL62
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