(8 nodes) Purine nucleobase metabolic process, and Molybdopterin dehydrogenase, FAD-binding network (Magnetospirillum sp. ME1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARJ67103.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (732 aa)
	ARJ67715.1	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
	ARJ67716.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
	ARJ67717.1	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
	ARJ68263.1	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	ARJ67749.1	4-hydroxybenzoyl-CoA reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	ARJ67750.1	4-hydroxybenzoyl-CoA reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (769 aa)
	ARJ67751.1	4-hydroxybenzoyl-CoA reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)

Your Current Organism:

Magnetospirillum sp. ME1

NCBI taxonomy Id: 1639348
Other names: M. sp. ME-1, Magnetospirillum sp. ME-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARJ67103.1	ARJ67715.1	WV31_16230	WV31_19670	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
ARJ67103.1	ARJ67716.1	WV31_16230	WV31_19675	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
ARJ67103.1	ARJ67717.1	WV31_16230	WV31_19680	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ARJ67103.1	ARJ67749.1	WV31_16230	WV31_19855	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
ARJ67103.1	ARJ67751.1	WV31_16230	WV31_19865	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ARJ67103.1	ARJ68263.1	WV31_16230	WV31_19850	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
ARJ67715.1	ARJ67103.1	WV31_19670	WV31_16230	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
ARJ67715.1	ARJ67716.1	WV31_19670	WV31_19675	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
ARJ67715.1	ARJ67717.1	WV31_19670	WV31_19680	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
ARJ67715.1	ARJ67749.1	WV31_19670	WV31_19855	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.844
ARJ67715.1	ARJ67750.1	WV31_19670	WV31_19860	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.812
ARJ67715.1	ARJ67751.1	WV31_19670	WV31_19865	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
ARJ67715.1	ARJ68263.1	WV31_19670	WV31_19850	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
ARJ67716.1	ARJ67103.1	WV31_19675	WV31_16230	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
ARJ67716.1	ARJ67715.1	WV31_19675	WV31_19670	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Purine catabolism protein pucB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
ARJ67716.1	ARJ67717.1	WV31_19675	WV31_19680	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ARJ67716.1	ARJ67750.1	WV31_19675	WV31_19860	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
ARJ67716.1	ARJ67751.1	WV31_19675	WV31_19865	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxybenzoyl-CoA reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
ARJ67716.1	ARJ68263.1	WV31_19675	WV31_19850	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
ARJ67717.1	ARJ67103.1	WV31_19680	WV31_16230	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996