(5 nodes) Mixed, incl. GDP dissociation inhibitor, and Guanyl-nucleotide exchange factor complex network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GAL0_PHYRM	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (462 aa)
	H3GC27_PHYRM	Uncharacterized protein. (220 aa)
	H3GHL1_PHYRM	ACB domain-containing protein. (1499 aa)
	H3GTY6_PHYRM	Uncharacterized protein. (315 aa)
	H3HDG0_PHYRM	Uncharacterized protein. (181 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3GAL0_PHYRM	H3GC27_PHYRM	H3GAL0	H3GC27	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.939
H3GAL0_PHYRM	H3GHL1_PHYRM	H3GAL0	H3GHL1	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	ACB domain-containing protein.	0.683
H3GAL0_PHYRM	H3GTY6_PHYRM	H3GAL0	H3GTY6	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.859
H3GAL0_PHYRM	H3HDG0_PHYRM	H3GAL0	H3HDG0	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.998
H3GC27_PHYRM	H3GAL0_PHYRM	H3GC27	H3GAL0	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.939
H3GC27_PHYRM	H3GHL1_PHYRM	H3GC27	H3GHL1	Uncharacterized protein.	ACB domain-containing protein.	0.713
H3GC27_PHYRM	H3GTY6_PHYRM	H3GC27	H3GTY6	Uncharacterized protein.	Uncharacterized protein.	0.686
H3GC27_PHYRM	H3HDG0_PHYRM	H3GC27	H3HDG0	Uncharacterized protein.	Uncharacterized protein.	0.805
H3GHL1_PHYRM	H3GAL0_PHYRM	H3GHL1	H3GAL0	ACB domain-containing protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.683
H3GHL1_PHYRM	H3GC27_PHYRM	H3GHL1	H3GC27	ACB domain-containing protein.	Uncharacterized protein.	0.713
H3GHL1_PHYRM	H3GTY6_PHYRM	H3GHL1	H3GTY6	ACB domain-containing protein.	Uncharacterized protein.	0.487
H3GHL1_PHYRM	H3HDG0_PHYRM	H3GHL1	H3HDG0	ACB domain-containing protein.	Uncharacterized protein.	0.952
H3GTY6_PHYRM	H3GAL0_PHYRM	H3GTY6	H3GAL0	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.859
H3GTY6_PHYRM	H3GC27_PHYRM	H3GTY6	H3GC27	Uncharacterized protein.	Uncharacterized protein.	0.686
H3GTY6_PHYRM	H3GHL1_PHYRM	H3GTY6	H3GHL1	Uncharacterized protein.	ACB domain-containing protein.	0.487
H3GTY6_PHYRM	H3HDG0_PHYRM	H3GTY6	H3HDG0	Uncharacterized protein.	Uncharacterized protein.	0.695
H3HDG0_PHYRM	H3GAL0_PHYRM	H3HDG0	H3GAL0	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.998
H3HDG0_PHYRM	H3GC27_PHYRM	H3HDG0	H3GC27	Uncharacterized protein.	Uncharacterized protein.	0.805
H3HDG0_PHYRM	H3GHL1_PHYRM	H3HDG0	H3GHL1	Uncharacterized protein.	ACB domain-containing protein.	0.952
H3HDG0_PHYRM	H3GTY6_PHYRM	H3HDG0	H3GTY6	Uncharacterized protein.	Uncharacterized protein.	0.695

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