STRINGSTRING
H3G4Y9_PHYRM H3G4Y9_PHYRM H3G560_PHYRM H3G560_PHYRM H3G7Y5_PHYRM H3G7Y5_PHYRM H3GER8_PHYRM H3GER8_PHYRM H3GI82_PHYRM H3GI82_PHYRM H3GKR7_PHYRM H3GKR7_PHYRM H3GLA8_PHYRM H3GLA8_PHYRM H3GQI3_PHYRM H3GQI3_PHYRM H3HCJ7_PHYRM H3HCJ7_PHYRM H3HDP3_PHYRM H3HDP3_PHYRM H3HE46_PHYRM H3HE46_PHYRM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3G4Y9_PHYRMUncharacterized protein. (569 aa)
H3G560_PHYRMATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (418 aa)
H3G7Y5_PHYRMDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (628 aa)
H3GER8_PHYRMDNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (336 aa)
H3GI82_PHYRMUncharacterized protein. (492 aa)
H3GKR7_PHYRMRECA_2 domain-containing protein. (798 aa)
H3GLA8_PHYRMUncharacterized protein. (139 aa)
H3GQI3_PHYRMATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (529 aa)
H3HCJ7_PHYRMUncharacterized protein. (450 aa)
H3HDP3_PHYRMATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (840 aa)
H3HE46_PHYRMRECA_2 domain-containing protein. (401 aa)
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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