STRINGSTRING
H3G5C8_PHYRM H3G5C8_PHYRM H3GFX6_PHYRM H3GFX6_PHYRM H3GGD4_PHYRM H3GGD4_PHYRM H3GTA2_PHYRM H3GTA2_PHYRM H3HDR8_PHYRM H3HDR8_PHYRM H3HE25_PHYRM H3HE25_PHYRM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3G5C8_PHYRMDNA ligase. (627 aa)
H3GFX6_PHYRMUncharacterized protein. (915 aa)
H3GGD4_PHYRMUncharacterized protein. (1368 aa)
H3GTA2_PHYRMVWFA domain-containing protein. (776 aa)
H3HDR8_PHYRMUncharacterized protein. (282 aa)
H3HE25_PHYRMDNA_ligase_OB_2 domain-containing protein. (630 aa)
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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