(32 nodes) Mixed, incl. De novo IMP biosynthetic process, and Tetrahydrofolate interconversion network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G4X3_PHYRM	AIRC domain-containing protein. (204 aa)
	H3G572_PHYRM	Uncharacterized protein. (71 aa)
	H3G5G0_PHYRM	ATP-grasp domain-containing protein. (578 aa)
	H3G779_PHYRM	Beta_elim_lyase domain-containing protein. (343 aa)
	H3G7B7_PHYRM	Uncharacterized protein. (294 aa)
	H3G7E1_PHYRM	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. (409 aa)
	H3G862_PHYRM	Uncharacterized protein. (638 aa)
	H3G863_PHYRM	MGS domain-containing protein. (616 aa)
	H3G8G6_PHYRM	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (977 aa)
	H3G8H8_PHYRM	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (480 aa)
	H3G8R8_PHYRM	Uncharacterized protein. (318 aa)
	H3G967_PHYRM	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (472 aa)
	H3G9D6_PHYRM	Glutamine amidotransferase type-1 domain-containing protein. (1366 aa)
	H3G9E0_PHYRM	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (390 aa)
	H3G9Y9_PHYRM	Amidophosphoribosyltransferase. (505 aa)
	H3GAS6_PHYRM	Uncharacterized protein. (300 aa)
	H3GAT2_PHYRM	Uncharacterized protein. (306 aa)
	H3GBX8_PHYRM	DAO domain-containing protein. (469 aa)
	H3GDX3_PHYRM	Uncharacterized protein. (700 aa)
	H3GHZ9_PHYRM	DAO domain-containing protein. (400 aa)
	H3GIF4_PHYRM	SAICAR_synt domain-containing protein. (341 aa)
	H3GN18_PHYRM	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (464 aa)
	H3GNW5_PHYRM	Uncharacterized protein. (754 aa)
	H3GR00_PHYRM	Uncharacterized protein. (311 aa)
	H3GS58_PHYRM	GCV_T domain-containing protein. (367 aa)
	H3GWN3_PHYRM	DAO domain-containing protein. (610 aa)
	H3GZT3_PHYRM	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (157 aa)
	H3H092_PHYRM	GCV_T domain-containing protein. (462 aa)
	H3H3C1_PHYRM	ATP-grasp domain-containing protein. (1146 aa)
	H3H6W0_PHYRM	Uncharacterized protein. (441 aa)
	H3HB68_PHYRM	J domain-containing protein. (379 aa)
	H3HC90_PHYRM	FSH1 domain-containing protein. (220 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G4X3_PHYRM	H3G572_PHYRM	H3G4X3	H3G572	AIRC domain-containing protein.	Uncharacterized protein.	0.402
H3G4X3_PHYRM	H3G7E1_PHYRM	H3G4X3	H3G7E1	AIRC domain-containing protein.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.825
H3G4X3_PHYRM	H3G862_PHYRM	H3G4X3	H3G862	AIRC domain-containing protein.	Uncharacterized protein.	0.838
H3G4X3_PHYRM	H3G863_PHYRM	H3G4X3	H3G863	AIRC domain-containing protein.	MGS domain-containing protein.	0.930
H3G4X3_PHYRM	H3G8G6_PHYRM	H3G4X3	H3G8G6	AIRC domain-containing protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.612
H3G4X3_PHYRM	H3G8H8_PHYRM	H3G4X3	H3G8H8	AIRC domain-containing protein.	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.950
H3G4X3_PHYRM	H3G967_PHYRM	H3G4X3	H3G967	AIRC domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.709
H3G4X3_PHYRM	H3G9D6_PHYRM	H3G4X3	H3G9D6	AIRC domain-containing protein.	Glutamine amidotransferase type-1 domain-containing protein.	0.853
H3G4X3_PHYRM	H3G9Y9_PHYRM	H3G4X3	H3G9Y9	AIRC domain-containing protein.	Amidophosphoribosyltransferase.	0.940
H3G4X3_PHYRM	H3GDX3_PHYRM	H3G4X3	H3GDX3	AIRC domain-containing protein.	Uncharacterized protein.	0.853
H3G4X3_PHYRM	H3GN18_PHYRM	H3G4X3	H3GN18	AIRC domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.709
H3G4X3_PHYRM	H3GNW5_PHYRM	H3G4X3	H3GNW5	AIRC domain-containing protein.	Uncharacterized protein.	0.853
H3G4X3_PHYRM	H3GR00_PHYRM	H3G4X3	H3GR00	AIRC domain-containing protein.	Uncharacterized protein.	0.918
H3G4X3_PHYRM	H3GZT3_PHYRM	H3G4X3	H3GZT3	AIRC domain-containing protein.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.537
H3G4X3_PHYRM	H3H3C1_PHYRM	H3G4X3	H3H3C1	AIRC domain-containing protein.	ATP-grasp domain-containing protein.	0.996
H3G4X3_PHYRM	H3H6W0_PHYRM	H3G4X3	H3H6W0	AIRC domain-containing protein.	Uncharacterized protein.	0.853
H3G572_PHYRM	H3G4X3_PHYRM	H3G572	H3G4X3	Uncharacterized protein.	AIRC domain-containing protein.	0.402
H3G572_PHYRM	H3G5G0_PHYRM	H3G572	H3G5G0	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.402
H3G572_PHYRM	H3G7E1_PHYRM	H3G572	H3G7E1	Uncharacterized protein.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.941
H3G572_PHYRM	H3G863_PHYRM	H3G572	H3G863	Uncharacterized protein.	MGS domain-containing protein.	0.927

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