(88 nodes) Fatty acid degradation, and Valine, leucine and isoleucine degradation network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G5D4_PHYRM	Uncharacterized protein. (365 aa)
	H3G5D6_PHYRM	Uncharacterized protein. (677 aa)
	H3G712_PHYRM	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (420 aa)
	H3G757_PHYRM	Uncharacterized protein. (387 aa)
	H3G7G8_PHYRM	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (254 aa)
	H3G7V0_PHYRM	Aldedh domain-containing protein. (85 aa)
	H3G7V1_PHYRM	Uncharacterized protein. (162 aa)
	H3G7V2_PHYRM	Uncharacterized protein. (129 aa)
	H3G836_PHYRM	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (455 aa)
	H3G843_PHYRM	Uncharacterized protein. (274 aa)
	H3G849_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (289 aa)
	H3G873_PHYRM	Aldedh domain-containing protein. (520 aa)
	H3G8A8_PHYRM	Uncharacterized protein. (511 aa)
	H3G8B1_PHYRM	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (568 aa)
	H3G8E1_PHYRM	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (414 aa)
	H3G8H9_PHYRM	Uncharacterized protein. (305 aa)
	H3G8I6_PHYRM	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (489 aa)
	H3G8L6_PHYRM	Uncharacterized protein. (394 aa)
	H3G932_PHYRM	Uncharacterized protein. (596 aa)
	H3G936_PHYRM	Uncharacterized protein. (411 aa)
	H3G981_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (285 aa)
	H3G9F5_PHYRM	Uncharacterized protein. (324 aa)
	H3G9H5_PHYRM	Uncharacterized protein. (398 aa)
	H3G9H8_PHYRM	Uncharacterized protein. (438 aa)
	H3G9K8_PHYRM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)
	H3G9S4_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (276 aa)
	H3G9X7_PHYRM	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (411 aa)
	H3G9Y1_PHYRM	Uncharacterized protein. (563 aa)
	H3GA11_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (252 aa)
	H3GA52_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (659 aa)
	H3GA53_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (660 aa)
	H3GAB1_PHYRM	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (514 aa)
	H3GAE7_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (685 aa)
	H3GAH4_PHYRM	Uncharacterized protein. (384 aa)
	H3GAK1_PHYRM	Pyruvate carboxyltransferase domain-containing protein. (309 aa)
	H3GAK3_PHYRM	Acetyl-coenzyme A synthetase. (642 aa)
	H3GAK4_PHYRM	Acetyl-coenzyme A synthetase. (633 aa)
	H3GAL6_PHYRM	ETF domain-containing protein. (251 aa)
	H3GAL7_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (556 aa)
	H3GAM7_PHYRM	Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. (487 aa)
	H3GAW6_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (682 aa)
	H3GAX7_PHYRM	Uncharacterized protein. (683 aa)
	H3GB46_PHYRM	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
	H3GB63_PHYRM	Acetyl-coenzyme A synthetase. (660 aa)
	H3GBG3_PHYRM	Uncharacterized protein. (451 aa)
	H3GCK8_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (601 aa)
	H3GD20_PHYRM	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (427 aa)
	H3GFE1_PHYRM	Uncharacterized protein. (609 aa)
	H3GJC1_PHYRM	Uncharacterized protein. (208 aa)
	H3GKE6_PHYRM	Uncharacterized protein. (375 aa)
	H3GL10_PHYRM	Fe-ADH domain-containing protein. (460 aa)
	H3GLR4_PHYRM	Uncharacterized protein. (269 aa)
	H3GLW0_PHYRM	Uncharacterized protein. (250 aa)
	H3GMC8_PHYRM	SAS-6_N domain-containing protein. (221 aa)
	H3GN76_PHYRM	Aldedh domain-containing protein. (509 aa)
	H3GN79_PHYRM	Aldedh domain-containing protein. (509 aa)
	H3GPH3_PHYRM	3HCDH_N domain-containing protein. (253 aa)
	H3GPX7_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (671 aa)
	H3GQ46_PHYRM	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (515 aa)
	H3GQ69_PHYRM	Uncharacterized protein. (420 aa)
	H3GQF9_PHYRM	Uncharacterized protein. (802 aa)
	H3GQH2_PHYRM	Radical_SAM domain-containing protein. (844 aa)
	H3GRB5_PHYRM	DRTGG domain-containing protein. (376 aa)
	H3GTJ6_PHYRM	Uncharacterized protein. (763 aa)
	H3GVX5_PHYRM	Uncharacterized protein. (732 aa)
	H3GVX6_PHYRM	Uncharacterized protein. (670 aa)
	H3GVY2_PHYRM	Uncharacterized protein. (366 aa)
	H3GWZ3_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (675 aa)
	H3GWZ5_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (663 aa)
	H3GX21_PHYRM	Carn_acyltransf domain-containing protein. (641 aa)
	H3H0E8_PHYRM	Uncharacterized protein. (281 aa)
	H3H1K9_PHYRM	Acetyl-coenzyme A synthetase. (660 aa)
	H3H1T3_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (348 aa)
	H3H347_PHYRM	3HCDH_N domain-containing protein. (274 aa)
	H3H420_PHYRM	Pex2_Pex12 domain-containing protein. (324 aa)
	H3H6U0_PHYRM	Uncharacterized protein. (433 aa)
	H3HA92_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (626 aa)
	H3HAA3_PHYRM	Aldedh domain-containing protein. (212 aa)
	H3HAV6_PHYRM	Carn_acyltransf domain-containing protein. (942 aa)
	H3HB29_PHYRM	ACB domain-containing protein. (361 aa)
	H3HB50_PHYRM	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (371 aa)
	H3HBC2_PHYRM	ETF domain-containing protein. (330 aa)
	H3HC55_PHYRM	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (289 aa)
	H3HC79_PHYRM	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (324 aa)
	H3HCF9_PHYRM	AB hydrolase-1 domain-containing protein. (289 aa)
	H3HD71_PHYRM	DRTGG domain-containing protein. (372 aa)
	H3HDB7_PHYRM	PDZ domain-containing protein. (525 aa)
	H3HE55_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (307 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G5D4_PHYRM	H3G5D6_PHYRM	H3G5D4	H3G5D6	Uncharacterized protein.	Uncharacterized protein.	0.566
H3G5D4_PHYRM	H3G712_PHYRM	H3G5D4	H3G712	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.894
H3G5D4_PHYRM	H3G757_PHYRM	H3G5D4	H3G757	Uncharacterized protein.	Uncharacterized protein.	0.518
H3G5D4_PHYRM	H3G7G8_PHYRM	H3G5D4	H3G7G8	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.649
H3G5D4_PHYRM	H3G7V1_PHYRM	H3G5D4	H3G7V1	Uncharacterized protein.	Uncharacterized protein.	0.533
H3G5D4_PHYRM	H3G7V2_PHYRM	H3G5D4	H3G7V2	Uncharacterized protein.	Uncharacterized protein.	0.533
H3G5D4_PHYRM	H3G843_PHYRM	H3G5D4	H3G843	Uncharacterized protein.	Uncharacterized protein.	0.649
H3G5D4_PHYRM	H3G849_PHYRM	H3G5D4	H3G849	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.534
H3G5D4_PHYRM	H3G873_PHYRM	H3G5D4	H3G873	Uncharacterized protein.	Aldedh domain-containing protein.	0.856
H3G5D4_PHYRM	H3G8A8_PHYRM	H3G5D4	H3G8A8	Uncharacterized protein.	Uncharacterized protein.	0.891
H3G5D4_PHYRM	H3G8B1_PHYRM	H3G5D4	H3G8B1	Uncharacterized protein.	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.	0.492
H3G5D4_PHYRM	H3G8E1_PHYRM	H3G5D4	H3G8E1	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.924
H3G5D4_PHYRM	H3G8H9_PHYRM	H3G5D4	H3G8H9	Uncharacterized protein.	Uncharacterized protein.	0.657
H3G5D4_PHYRM	H3G8I6_PHYRM	H3G5D4	H3G8I6	Uncharacterized protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.651
H3G5D4_PHYRM	H3G8L6_PHYRM	H3G5D4	H3G8L6	Uncharacterized protein.	Uncharacterized protein.	0.465
H3G5D4_PHYRM	H3G932_PHYRM	H3G5D4	H3G932	Uncharacterized protein.	Uncharacterized protein.	0.484
H3G5D4_PHYRM	H3G936_PHYRM	H3G5D4	H3G936	Uncharacterized protein.	Uncharacterized protein.	0.572
H3G5D4_PHYRM	H3G981_PHYRM	H3G5D4	H3G981	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.651
H3G5D4_PHYRM	H3G9F5_PHYRM	H3G5D4	H3G9F5	Uncharacterized protein.	Uncharacterized protein.	0.890
H3G5D4_PHYRM	H3G9H5_PHYRM	H3G5D4	H3G9H5	Uncharacterized protein.	Uncharacterized protein.	0.797

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