(17 nodes) Lipid oxidation, and 3-hydroxyacyl-CoA dehydrogenase, NAD binding network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G712_PHYRM	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (420 aa)
	H3G8A8_PHYRM	Uncharacterized protein. (511 aa)
	H3G9F5_PHYRM	Uncharacterized protein. (324 aa)
	H3G9H8_PHYRM	Uncharacterized protein. (438 aa)
	H3G9X7_PHYRM	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (411 aa)
	H3GA53_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (660 aa)
	H3GAE7_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (685 aa)
	H3GAL7_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (556 aa)
	H3GAX7_PHYRM	Uncharacterized protein. (683 aa)
	H3GB46_PHYRM	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
	H3GCK8_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (601 aa)
	H3GPH3_PHYRM	3HCDH_N domain-containing protein. (253 aa)
	H3GPX7_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (671 aa)
	H3GWZ3_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (675 aa)
	H3H1T3_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (348 aa)
	H3HA92_PHYRM	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (626 aa)
	H3HE55_PHYRM	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (307 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G712_PHYRM	H3G8A8_PHYRM	H3G712	H3G8A8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.949
H3G712_PHYRM	H3G9F5_PHYRM	H3G712	H3G9F5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.991
H3G712_PHYRM	H3G9H8_PHYRM	H3G712	H3G9H8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.961
H3G712_PHYRM	H3G9X7_PHYRM	H3G712	H3G9X7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.917
H3G712_PHYRM	H3GA53_PHYRM	H3G712	H3GA53	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.948
H3G712_PHYRM	H3GAE7_PHYRM	H3G712	H3GAE7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.995
H3G712_PHYRM	H3GAL7_PHYRM	H3G712	H3GAL7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.948
H3G712_PHYRM	H3GAX7_PHYRM	H3G712	H3GAX7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.936
H3G712_PHYRM	H3GB46_PHYRM	H3G712	H3GB46	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.965
H3G712_PHYRM	H3GCK8_PHYRM	H3G712	H3GCK8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.948
H3G712_PHYRM	H3GPH3_PHYRM	H3G712	H3GPH3	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	3HCDH_N domain-containing protein.	0.990
H3G712_PHYRM	H3GPX7_PHYRM	H3G712	H3GPX7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.964
H3G712_PHYRM	H3GWZ3_PHYRM	H3G712	H3GWZ3	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.948
H3G712_PHYRM	H3H1T3_PHYRM	H3G712	H3H1T3	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.969
H3G712_PHYRM	H3HA92_PHYRM	H3G712	H3HA92	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.948
H3G712_PHYRM	H3HE55_PHYRM	H3G712	H3HE55	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.969
H3G8A8_PHYRM	H3G712_PHYRM	H3G8A8	H3G712	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.949
H3G8A8_PHYRM	H3G9F5_PHYRM	H3G8A8	H3G9F5	Uncharacterized protein.	Uncharacterized protein.	0.917
H3G8A8_PHYRM	H3G9H8_PHYRM	H3G8A8	H3G9H8	Uncharacterized protein.	Uncharacterized protein.	0.936
H3G8A8_PHYRM	H3G9X7_PHYRM	H3G8A8	H3G9X7	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.949

page 1 of 14

Server load: medium (56%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About