(6 nodes) Pex, N-terminal, and Acyl CoA binding protein network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GKE6_PHYRM	Uncharacterized protein. (375 aa)
	H3GLR4_PHYRM	Uncharacterized protein. (269 aa)
	H3H420_PHYRM	Pex2_Pex12 domain-containing protein. (324 aa)
	H3HB29_PHYRM	ACB domain-containing protein. (361 aa)
	H3HB50_PHYRM	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (371 aa)
	H3HDB7_PHYRM	PDZ domain-containing protein. (525 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3GKE6_PHYRM	H3GLR4_PHYRM	H3GKE6	H3GLR4	Uncharacterized protein.	Uncharacterized protein.	0.774
H3GKE6_PHYRM	H3H420_PHYRM	H3GKE6	H3H420	Uncharacterized protein.	Pex2_Pex12 domain-containing protein.	0.974
H3GKE6_PHYRM	H3HB29_PHYRM	H3GKE6	H3HB29	Uncharacterized protein.	ACB domain-containing protein.	0.918
H3GKE6_PHYRM	H3HB50_PHYRM	H3GKE6	H3HB50	Uncharacterized protein.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.974
H3GKE6_PHYRM	H3HDB7_PHYRM	H3GKE6	H3HDB7	Uncharacterized protein.	PDZ domain-containing protein.	0.978
H3GLR4_PHYRM	H3GKE6_PHYRM	H3GLR4	H3GKE6	Uncharacterized protein.	Uncharacterized protein.	0.774
H3GLR4_PHYRM	H3H420_PHYRM	H3GLR4	H3H420	Uncharacterized protein.	Pex2_Pex12 domain-containing protein.	0.974
H3GLR4_PHYRM	H3HB29_PHYRM	H3GLR4	H3HB29	Uncharacterized protein.	ACB domain-containing protein.	0.929
H3GLR4_PHYRM	H3HB50_PHYRM	H3GLR4	H3HB50	Uncharacterized protein.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.974
H3GLR4_PHYRM	H3HDB7_PHYRM	H3GLR4	H3HDB7	Uncharacterized protein.	PDZ domain-containing protein.	0.978
H3H420_PHYRM	H3GKE6_PHYRM	H3H420	H3GKE6	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.974
H3H420_PHYRM	H3GLR4_PHYRM	H3H420	H3GLR4	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.974
H3H420_PHYRM	H3HB29_PHYRM	H3H420	H3HB29	Pex2_Pex12 domain-containing protein.	ACB domain-containing protein.	0.974
H3H420_PHYRM	H3HB50_PHYRM	H3H420	H3HB50	Pex2_Pex12 domain-containing protein.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.998
H3H420_PHYRM	H3HDB7_PHYRM	H3H420	H3HDB7	Pex2_Pex12 domain-containing protein.	PDZ domain-containing protein.	0.723
H3HB29_PHYRM	H3GKE6_PHYRM	H3HB29	H3GKE6	ACB domain-containing protein.	Uncharacterized protein.	0.918
H3HB29_PHYRM	H3GLR4_PHYRM	H3HB29	H3GLR4	ACB domain-containing protein.	Uncharacterized protein.	0.929
H3HB29_PHYRM	H3H420_PHYRM	H3HB29	H3H420	ACB domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.974
H3HB29_PHYRM	H3HB50_PHYRM	H3HB29	H3HB50	ACB domain-containing protein.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.974
H3HB29_PHYRM	H3HDB7_PHYRM	H3HB29	H3HDB7	ACB domain-containing protein.	PDZ domain-containing protein.	0.978

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