(62 nodes) Mixed, incl. Sulfuric ester hydrolase activity, and Alcohol dehydrogenase-like, C-terminal network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G5F4_PHYRM	Uncharacterized protein. (342 aa)
	H3G5R7_PHYRM	Uncharacterized protein. (68 aa)
	H3G6J3_PHYRM	ADH_N domain-containing protein. (191 aa)
	H3G6R5_PHYRM	Cutinase domain-containing protein. (216 aa)
	H3G6T8_PHYRM	ADH_N domain-containing protein. (84 aa)
	H3G706_PHYRM	Uncharacterized protein. (330 aa)
	H3G7K1_PHYRM	Mac domain-containing protein. (184 aa)
	H3G8T2_PHYRM	PKS_ER domain-containing protein. (338 aa)
	H3G8W7_PHYRM	Uncharacterized protein. (282 aa)
	H3G908_PHYRM	Aldo_ket_red domain-containing protein. (279 aa)
	H3G929_PHYRM	ADH_N domain-containing protein. (397 aa)
	H3G972_PHYRM	Uncharacterized protein. (570 aa)
	H3G9D3_PHYRM	Uncharacterized protein. (347 aa)
	H3G9E7_PHYRM	Cutinase domain-containing protein. (224 aa)
	H3G9U2_PHYRM	GFO_IDH_MocA domain-containing protein. (345 aa)
	H3G9U6_PHYRM	Aldo_ket_red domain-containing protein. (277 aa)
	H3GA14_PHYRM	PKS_ER domain-containing protein. (353 aa)
	H3GA63_PHYRM	Xylose isomerase. (452 aa)
	H3GAB3_PHYRM	PKS_ER domain-containing protein. (334 aa)
	H3GAC5_PHYRM	Uncharacterized protein. (334 aa)
	H3GAJ7_PHYRM	PKS_ER domain-containing protein. (354 aa)
	H3GAR5_PHYRM	PKS_ER domain-containing protein. (353 aa)
	H3GAR6_PHYRM	PKS_ER domain-containing protein. (361 aa)
	H3GAS3_PHYRM	Aldo_ket_red domain-containing protein. (293 aa)
	H3GBQ6_PHYRM	Uncharacterized protein. (554 aa)
	H3GC62_PHYRM	Uncharacterized protein. (1091 aa)
	H3GCL3_PHYRM	FAD-binding PCMH-type domain-containing protein. (574 aa)
	H3GEE8_PHYRM	Uncharacterized protein. (190 aa)
	H3GGC1_PHYRM	Sulfatase domain-containing protein. (808 aa)
	H3GGC2_PHYRM	Sulfatase domain-containing protein. (844 aa)
	H3GGP1_PHYRM	Cutinase domain-containing protein. (217 aa)
	H3GKK1_PHYRM	Uncharacterized protein. (427 aa)
	H3GKK5_PHYRM	Protein kinase domain-containing protein. (1103 aa)
	H3GME0_PHYRM	Aldo_ket_red domain-containing protein. (275 aa)
	H3GMU3_PHYRM	Rhodanese domain-containing protein. (559 aa)
	H3GP18_PHYRM	Sulfatase domain-containing protein. (480 aa)
	H3GP95_PHYRM	Cutinase domain-containing protein. (214 aa)
	H3GPP8_PHYRM	TauD domain-containing protein. (351 aa)
	H3GSE2_PHYRM	ADH_zinc_N domain-containing protein. (305 aa)
	H3GTP5_PHYRM	Uncharacterized protein. (279 aa)
	H3GTQ0_PHYRM	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (279 aa)
	H3GUI7_PHYRM	Uncharacterized protein. (678 aa)
	H3GUI8_PHYRM	GFO_IDH_MocA domain-containing protein. (352 aa)
	H3GVD8_PHYRM	Sulfatase domain-containing protein. (874 aa)
	H3GW73_PHYRM	Hcy-binding domain-containing protein. (320 aa)
	H3GXE6_PHYRM	Sulfatase domain-containing protein. (887 aa)
	H3GXE7_PHYRM	Sulfatase domain-containing protein. (792 aa)
	H3GXE9_PHYRM	Sulfatase domain-containing protein. (859 aa)
	H3GXF0_PHYRM	Sulfatase domain-containing protein. (551 aa)
	H3GXF8_PHYRM	Uncharacterized protein. (125 aa)
	H3GYW8_PHYRM	Sulfatase domain-containing protein. (806 aa)
	H3GZ61_PHYRM	Uncharacterized protein. (401 aa)
	H3GZ96_PHYRM	PKS_ER domain-containing protein. (302 aa)
	H3H0H5_PHYRM	Sulfatase domain-containing protein. (1133 aa)
	H3H4S9_PHYRM	ADH_zinc_N domain-containing protein. (425 aa)
	H3H5P6_PHYRM	Sulfatase domain-containing protein. (745 aa)
	H3HA90_PHYRM	ADH_zinc_N domain-containing protein. (235 aa)
	H3HBS6_PHYRM	Uncharacterized protein. (391 aa)
	H3HBV3_PHYRM	Uncharacterized protein. (1268 aa)
	H3HDN7_PHYRM	PKS_ER domain-containing protein. (721 aa)
	H3HDW9_PHYRM	Uncharacterized protein; Belongs to the DapA family. (292 aa)
	H3HE36_PHYRM	Beta-galactosidase. (1028 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G5F4_PHYRM	H3G5R7_PHYRM	H3G5F4	H3G5R7	Uncharacterized protein.	Uncharacterized protein.	0.503
H3G5F4_PHYRM	H3G6J3_PHYRM	H3G5F4	H3G6J3	Uncharacterized protein.	ADH_N domain-containing protein.	0.432
H3G5F4_PHYRM	H3G6T8_PHYRM	H3G5F4	H3G6T8	Uncharacterized protein.	ADH_N domain-containing protein.	0.432
H3G5F4_PHYRM	H3G706_PHYRM	H3G5F4	H3G706	Uncharacterized protein.	Uncharacterized protein.	0.472
H3G5F4_PHYRM	H3G8T2_PHYRM	H3G5F4	H3G8T2	Uncharacterized protein.	PKS_ER domain-containing protein.	0.422
H3G5F4_PHYRM	H3G908_PHYRM	H3G5F4	H3G908	Uncharacterized protein.	Aldo_ket_red domain-containing protein.	0.529
H3G5F4_PHYRM	H3G972_PHYRM	H3G5F4	H3G972	Uncharacterized protein.	Uncharacterized protein.	0.652
H3G5F4_PHYRM	H3G9D3_PHYRM	H3G5F4	H3G9D3	Uncharacterized protein.	Uncharacterized protein.	0.476
H3G5F4_PHYRM	H3G9U2_PHYRM	H3G5F4	H3G9U2	Uncharacterized protein.	GFO_IDH_MocA domain-containing protein.	0.472
H3G5F4_PHYRM	H3G9U6_PHYRM	H3G5F4	H3G9U6	Uncharacterized protein.	Aldo_ket_red domain-containing protein.	0.529
H3G5F4_PHYRM	H3GA14_PHYRM	H3G5F4	H3GA14	Uncharacterized protein.	PKS_ER domain-containing protein.	0.432
H3G5F4_PHYRM	H3GA63_PHYRM	H3G5F4	H3GA63	Uncharacterized protein.	Xylose isomerase.	0.503
H3G5F4_PHYRM	H3GAB3_PHYRM	H3G5F4	H3GAB3	Uncharacterized protein.	PKS_ER domain-containing protein.	0.422
H3G5F4_PHYRM	H3GAC5_PHYRM	H3G5F4	H3GAC5	Uncharacterized protein.	Uncharacterized protein.	0.507
H3G5F4_PHYRM	H3GAJ7_PHYRM	H3G5F4	H3GAJ7	Uncharacterized protein.	PKS_ER domain-containing protein.	0.432
H3G5F4_PHYRM	H3GAR5_PHYRM	H3G5F4	H3GAR5	Uncharacterized protein.	PKS_ER domain-containing protein.	0.432
H3G5F4_PHYRM	H3GAR6_PHYRM	H3G5F4	H3GAR6	Uncharacterized protein.	PKS_ER domain-containing protein.	0.432
H3G5F4_PHYRM	H3GAS3_PHYRM	H3G5F4	H3GAS3	Uncharacterized protein.	Aldo_ket_red domain-containing protein.	0.529
H3G5F4_PHYRM	H3GBQ6_PHYRM	H3G5F4	H3GBQ6	Uncharacterized protein.	Uncharacterized protein.	0.693
H3G5F4_PHYRM	H3GC62_PHYRM	H3G5F4	H3GC62	Uncharacterized protein.	Uncharacterized protein.	0.582

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