(23 nodes) Mixed, incl. NUDIX domain, and HIT domain network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G780_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (458 aa)
	H3G7L6_PHYRM	HIT domain-containing protein. (123 aa)
	H3G7U0_PHYRM	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. (235 aa)
	H3G7W8_PHYRM	LSM14 domain-containing protein. (83 aa)
	H3G996_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (410 aa)
	H3GDP9_PHYRM	Nudix hydrolase domain-containing protein. (269 aa)
	H3GDR2_PHYRM	Nudix hydrolase domain-containing protein. (343 aa)
	H3GFP6_PHYRM	mRNA_decap_C domain-containing protein. (319 aa)
	H3GFP9_PHYRM	HIT domain-containing protein. (144 aa)
	H3GGB0_PHYRM	Nudix hydrolase domain-containing protein. (254 aa)
	H3GGM6_PHYRM	C3H1-type domain-containing protein. (198 aa)
	H3GLK3_PHYRM	MoCF_biosynth domain-containing protein. (1405 aa)
	H3GND3_PHYRM	Uncharacterized protein. (1612 aa)
	H3GNL9_PHYRM	Uncharacterized protein. (249 aa)
	H3GNM1_PHYRM	Nudix hydrolase domain-containing protein. (429 aa)
	H3GQT7_PHYRM	Uncharacterized protein. (750 aa)
	H3GRW0_PHYRM	Nudix hydrolase domain-containing protein. (258 aa)
	H3GYJ7_PHYRM	Nudix hydrolase domain-containing protein. (194 aa)
	H3H010_PHYRM	HIT domain-containing protein. (352 aa)
	H3H315_PHYRM	Nudix hydrolase domain-containing protein. (341 aa)
	H3H674_PHYRM	Nudix hydrolase domain-containing protein. (353 aa)
	H3H6B9_PHYRM	Nudix hydrolase domain-containing protein. (258 aa)
	H3H7E1_PHYRM	Uncharacterized protein. (191 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G780_PHYRM	H3G7U0_PHYRM	H3G780	H3G7U0	Uncharacterized protein; Belongs to the DEAD box helicase family.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	0.745
H3G780_PHYRM	H3G7W8_PHYRM	H3G780	H3G7W8	Uncharacterized protein; Belongs to the DEAD box helicase family.	LSM14 domain-containing protein.	0.574
H3G780_PHYRM	H3G996_PHYRM	H3G780	H3G996	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.774
H3G780_PHYRM	H3GDP9_PHYRM	H3G780	H3GDP9	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nudix hydrolase domain-containing protein.	0.481
H3G780_PHYRM	H3GDR2_PHYRM	H3G780	H3GDR2	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nudix hydrolase domain-containing protein.	0.481
H3G780_PHYRM	H3GFP6_PHYRM	H3G780	H3GFP6	Uncharacterized protein; Belongs to the DEAD box helicase family.	mRNA_decap_C domain-containing protein.	0.682
H3G780_PHYRM	H3GLK3_PHYRM	H3G780	H3GLK3	Uncharacterized protein; Belongs to the DEAD box helicase family.	MoCF_biosynth domain-containing protein.	0.621
H3G780_PHYRM	H3GND3_PHYRM	H3G780	H3GND3	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.418
H3G780_PHYRM	H3GNM1_PHYRM	H3G780	H3GNM1	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nudix hydrolase domain-containing protein.	0.580
H3G780_PHYRM	H3GRW0_PHYRM	H3G780	H3GRW0	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nudix hydrolase domain-containing protein.	0.481
H3G780_PHYRM	H3GYJ7_PHYRM	H3G780	H3GYJ7	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nudix hydrolase domain-containing protein.	0.481
H3G780_PHYRM	H3H315_PHYRM	H3G780	H3H315	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nudix hydrolase domain-containing protein.	0.481
H3G780_PHYRM	H3H674_PHYRM	H3G780	H3H674	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nudix hydrolase domain-containing protein.	0.481
H3G780_PHYRM	H3H6B9_PHYRM	H3G780	H3H6B9	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nudix hydrolase domain-containing protein.	0.481
H3G7L6_PHYRM	H3GDP9_PHYRM	H3G7L6	H3GDP9	HIT domain-containing protein.	Nudix hydrolase domain-containing protein.	0.559
H3G7L6_PHYRM	H3GDR2_PHYRM	H3G7L6	H3GDR2	HIT domain-containing protein.	Nudix hydrolase domain-containing protein.	0.559
H3G7L6_PHYRM	H3GGB0_PHYRM	H3G7L6	H3GGB0	HIT domain-containing protein.	Nudix hydrolase domain-containing protein.	0.474
H3G7L6_PHYRM	H3GNM1_PHYRM	H3G7L6	H3GNM1	HIT domain-containing protein.	Nudix hydrolase domain-containing protein.	0.523
H3G7L6_PHYRM	H3GRW0_PHYRM	H3G7L6	H3GRW0	HIT domain-containing protein.	Nudix hydrolase domain-containing protein.	0.523
H3G7L6_PHYRM	H3GYJ7_PHYRM	H3G7L6	H3GYJ7	HIT domain-containing protein.	Nudix hydrolase domain-containing protein.	0.559

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