21 items (Phytophthora ramorum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G7D6_PHYRM	Uncharacterized protein. (106 aa)
	H3G8U8_PHYRM	Uncharacterized protein. (160 aa)
	H3GCE0_PHYRM	Uncharacterized protein. (557 aa)
	H3GDK6_PHYRM	Uncharacterized protein. (808 aa)
	H3GGH8_PHYRM	FCP1 homology domain-containing protein. (429 aa)
	H3GIG7_PHYRM	Uncharacterized protein. (767 aa)
	H3GJ00_PHYRM	LNS2 domain-containing protein. (870 aa)
	H3GKK6_PHYRM	Uncharacterized protein. (326 aa)
	H3GMW7_PHYRM	Uncharacterized protein. (566 aa)
	H3GQ39_PHYRM	FCP1 homology domain-containing protein. (338 aa)
	H3GR51_PHYRM	Uncharacterized protein. (549 aa)
	H3GTV8_PHYRM	PH domain-containing protein. (1109 aa)
	H3GVD6_PHYRM	Uncharacterized protein. (298 aa)
	H3GWG7_PHYRM	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (375 aa)
	H3GXJ8_PHYRM	FCP1 homology domain-containing protein. (237 aa)
	H3GZR9_PHYRM	Uncharacterized protein. (567 aa)
	H3H0P5_PHYRM	J domain-containing protein. (161 aa)
	H3H139_PHYRM	Uncharacterized protein. (590 aa)
	H3H446_PHYRM	Uncharacterized protein. (563 aa)
	H3H7N7_PHYRM	Uncharacterized protein. (551 aa)
	H3H8A7_PHYRM	Uncharacterized protein. (537 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G7D6_PHYRM	H3G8U8_PHYRM	H3G7D6	H3G8U8	Uncharacterized protein.	Uncharacterized protein.	0.985
H3G7D6_PHYRM	H3GCE0_PHYRM	H3G7D6	H3GCE0	Uncharacterized protein.	Uncharacterized protein.	0.435
H3G7D6_PHYRM	H3GDK6_PHYRM	H3G7D6	H3GDK6	Uncharacterized protein.	Uncharacterized protein.	0.623
H3G7D6_PHYRM	H3GGH8_PHYRM	H3G7D6	H3GGH8	Uncharacterized protein.	FCP1 homology domain-containing protein.	0.630
H3G7D6_PHYRM	H3GIG7_PHYRM	H3G7D6	H3GIG7	Uncharacterized protein.	Uncharacterized protein.	0.986
H3G7D6_PHYRM	H3GMW7_PHYRM	H3G7D6	H3GMW7	Uncharacterized protein.	Uncharacterized protein.	0.435
H3G7D6_PHYRM	H3GQ39_PHYRM	H3G7D6	H3GQ39	Uncharacterized protein.	FCP1 homology domain-containing protein.	0.630
H3G7D6_PHYRM	H3GR51_PHYRM	H3G7D6	H3GR51	Uncharacterized protein.	Uncharacterized protein.	0.978
H3G7D6_PHYRM	H3GVD6_PHYRM	H3G7D6	H3GVD6	Uncharacterized protein.	Uncharacterized protein.	0.435
H3G7D6_PHYRM	H3GWG7_PHYRM	H3G7D6	H3GWG7	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.951
H3G7D6_PHYRM	H3GXJ8_PHYRM	H3G7D6	H3GXJ8	Uncharacterized protein.	FCP1 homology domain-containing protein.	0.630
H3G7D6_PHYRM	H3GZR9_PHYRM	H3G7D6	H3GZR9	Uncharacterized protein.	Uncharacterized protein.	0.435
H3G7D6_PHYRM	H3H0P5_PHYRM	H3G7D6	H3H0P5	Uncharacterized protein.	J domain-containing protein.	0.989
H3G7D6_PHYRM	H3H139_PHYRM	H3G7D6	H3H139	Uncharacterized protein.	Uncharacterized protein.	0.435
H3G7D6_PHYRM	H3H446_PHYRM	H3G7D6	H3H446	Uncharacterized protein.	Uncharacterized protein.	0.435
H3G7D6_PHYRM	H3H7N7_PHYRM	H3G7D6	H3H7N7	Uncharacterized protein.	Uncharacterized protein.	0.435
H3G7D6_PHYRM	H3H8A7_PHYRM	H3G7D6	H3H8A7	Uncharacterized protein.	Uncharacterized protein.	0.435
H3G8U8_PHYRM	H3G7D6_PHYRM	H3G8U8	H3G7D6	Uncharacterized protein.	Uncharacterized protein.	0.985
H3G8U8_PHYRM	H3GCE0_PHYRM	H3G8U8	H3GCE0	Uncharacterized protein.	Uncharacterized protein.	0.712
H3G8U8_PHYRM	H3GDK6_PHYRM	H3G8U8	H3GDK6	Uncharacterized protein.	Uncharacterized protein.	0.807

page 1 of 12

Server load: low (26%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2025

Credits

Access

Info

About