41 items (Phytophthora ramorum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	H3G513_PHYRM	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (285 aa)
	H3GBD2_PHYRM	Uncharacterized protein. (358 aa)
	H3GBJ2_PHYRM	ATG11 domain-containing protein. (972 aa)
	H3GBW1_PHYRM	Fe2OG dioxygenase domain-containing protein. (346 aa)
	H3GE53_PHYRM	Uncharacterized protein. (112 aa)
	H3GF06_PHYRM	Autophagy protein 5; Involved in autophagic vesicle formation. (289 aa)
	H3GFE9_PHYRM	Uncharacterized protein. (386 aa)
	H3GHI8_PHYRM	Protein kinase domain-containing protein. (892 aa)
	H3GIC5_PHYRM	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (320 aa)
	H3GIW4_PHYRM	WD_REPEATS_REGION domain-containing protein. (408 aa)
	H3GKJ2_PHYRM	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1011 aa)
	H3GKQ3_PHYRM	Autophagy_act_C domain-containing protein. (185 aa)
	H3GM26_PHYRM	Uncharacterized protein. (431 aa)
	H3GM69_PHYRM	Uncharacterized protein. (487 aa)
	H3GMI2_PHYRM	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (347 aa)
	H3GMI3_PHYRM	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (347 aa)
	H3GMI9_PHYRM	Uncharacterized protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (551 aa)
	H3GMJ0_PHYRM	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (313 aa)
	H3GMJ1_PHYRM	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (359 aa)
	H3GMY0_PHYRM	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (740 aa)
	H3GNA2_PHYRM	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (234 aa)
	H3GPC6_PHYRM	Autophagy-related protein 3. (331 aa)
	H3GPE9_PHYRM	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (705 aa)
	H3GQD6_PHYRM	Uncharacterized protein. (250 aa)
	H3GS62_PHYRM	Uncharacterized protein. (565 aa)
	H3GSP1_PHYRM	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (258 aa)
	H3GSP3_PHYRM	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (229 aa)
	H3GTH1_PHYRM	Uncharacterized protein. (513 aa)
	H3GX01_PHYRM	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (342 aa)
	H3GXC4_PHYRM	Uncharacterized protein. (2483 aa)
	H3GY00_PHYRM	WW domain-containing protein. (837 aa)
	H3GYM4_PHYRM	Uncharacterized protein. (2040 aa)
	H3GZ44_PHYRM	Golgi apparatus membrane protein TVP23 homolog. (254 aa)
	H3GZX2_PHYRM	Uncharacterized protein. (381 aa)
	H3H028_PHYRM	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (777 aa)
	H3H035_PHYRM	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (193 aa)
	H3H0L8_PHYRM	ATG13 domain-containing protein. (852 aa)
	H3H3A8_PHYRM	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (962 aa)
	H3H8T9_PHYRM	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (347 aa)
	H3HC37_PHYRM	Uncharacterized protein. (155 aa)
	H3HD89_PHYRM	Protein kinase domain-containing protein. (962 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G513_PHYRM	H3GE53_PHYRM	H3G513	H3GE53	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	Uncharacterized protein.	0.837
H3G513_PHYRM	H3GHI8_PHYRM	H3G513	H3GHI8	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	Protein kinase domain-containing protein.	0.457
H3G513_PHYRM	H3GMY0_PHYRM	H3G513	H3GMY0	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.507
H3G513_PHYRM	H3H0L8_PHYRM	H3G513	H3H0L8	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	ATG13 domain-containing protein.	0.840
H3G513_PHYRM	H3H8T9_PHYRM	H3G513	H3H8T9	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.507
H3G513_PHYRM	H3HD89_PHYRM	H3G513	H3HD89	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	Protein kinase domain-containing protein.	0.457
H3GBD2_PHYRM	H3GE53_PHYRM	H3GBD2	H3GE53	Uncharacterized protein.	Uncharacterized protein.	0.837
H3GBD2_PHYRM	H3GHI8_PHYRM	H3GBD2	H3GHI8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.457
H3GBD2_PHYRM	H3GMY0_PHYRM	H3GBD2	H3GMY0	Uncharacterized protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.507
H3GBD2_PHYRM	H3H0L8_PHYRM	H3GBD2	H3H0L8	Uncharacterized protein.	ATG13 domain-containing protein.	0.840
H3GBD2_PHYRM	H3H8T9_PHYRM	H3GBD2	H3H8T9	Uncharacterized protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.507
H3GBD2_PHYRM	H3HD89_PHYRM	H3GBD2	H3HD89	Uncharacterized protein.	Protein kinase domain-containing protein.	0.457
H3GBJ2_PHYRM	H3GHI8_PHYRM	H3GBJ2	H3GHI8	ATG11 domain-containing protein.	Protein kinase domain-containing protein.	0.923
H3GBJ2_PHYRM	H3GKJ2_PHYRM	H3GBJ2	H3GKJ2	ATG11 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.449
H3GBJ2_PHYRM	H3GMY0_PHYRM	H3GBJ2	H3GMY0	ATG11 domain-containing protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.485
H3GBJ2_PHYRM	H3GQD6_PHYRM	H3GBJ2	H3GQD6	ATG11 domain-containing protein.	Uncharacterized protein.	0.904
H3GBJ2_PHYRM	H3GTH1_PHYRM	H3GBJ2	H3GTH1	ATG11 domain-containing protein.	Uncharacterized protein.	0.507
H3GBJ2_PHYRM	H3GY00_PHYRM	H3GBJ2	H3GY00	ATG11 domain-containing protein.	WW domain-containing protein.	0.507
H3GBJ2_PHYRM	H3GYM4_PHYRM	H3GBJ2	H3GYM4	ATG11 domain-containing protein.	Uncharacterized protein.	0.459
H3GBJ2_PHYRM	H3H0L8_PHYRM	H3GBJ2	H3H0L8	ATG11 domain-containing protein.	ATG13 domain-containing protein.	0.961

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