(12 nodes) Phosphatidylinositol 3-kinase complex, class III, type I, and Autophagy network (Phytophthora ramorum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	H3GF06_PHYRM	Autophagy protein 5; Involved in autophagic vesicle formation. (289 aa)
	H3GIW4_PHYRM	WD_REPEATS_REGION domain-containing protein. (408 aa)
	H3GKJ2_PHYRM	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1011 aa)
	H3GPC6_PHYRM	Autophagy-related protein 3. (331 aa)
	H3GPE9_PHYRM	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (705 aa)
	H3GS62_PHYRM	Uncharacterized protein. (565 aa)
	H3GTH1_PHYRM	Uncharacterized protein. (513 aa)
	H3GY00_PHYRM	WW domain-containing protein. (837 aa)
	H3GYM4_PHYRM	Uncharacterized protein. (2040 aa)
	H3H028_PHYRM	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (777 aa)
	H3H3A8_PHYRM	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (962 aa)
	H3HD89_PHYRM	Protein kinase domain-containing protein. (962 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3GF06_PHYRM	H3GIW4_PHYRM	H3GF06	H3GIW4	Autophagy protein 5; Involved in autophagic vesicle formation.	WD_REPEATS_REGION domain-containing protein.	0.998
H3GF06_PHYRM	H3GKJ2_PHYRM	H3GF06	H3GKJ2	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.779
H3GF06_PHYRM	H3GPC6_PHYRM	H3GF06	H3GPC6	Autophagy protein 5; Involved in autophagic vesicle formation.	Autophagy-related protein 3.	0.993
H3GF06_PHYRM	H3GPE9_PHYRM	H3GF06	H3GPE9	Autophagy protein 5; Involved in autophagic vesicle formation.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.853
H3GF06_PHYRM	H3GS62_PHYRM	H3GF06	H3GS62	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein.	0.449
H3GF06_PHYRM	H3GTH1_PHYRM	H3GF06	H3GTH1	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein.	0.754
H3GF06_PHYRM	H3GY00_PHYRM	H3GF06	H3GY00	Autophagy protein 5; Involved in autophagic vesicle formation.	WW domain-containing protein.	0.754
H3GF06_PHYRM	H3GYM4_PHYRM	H3GF06	H3GYM4	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein.	0.777
H3GF06_PHYRM	H3H028_PHYRM	H3GF06	H3H028	Autophagy protein 5; Involved in autophagic vesicle formation.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.474
H3GF06_PHYRM	H3H3A8_PHYRM	H3GF06	H3H3A8	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.779
H3GF06_PHYRM	H3HD89_PHYRM	H3GF06	H3HD89	Autophagy protein 5; Involved in autophagic vesicle formation.	Protein kinase domain-containing protein.	0.938
H3GIW4_PHYRM	H3GF06_PHYRM	H3GIW4	H3GF06	WD_REPEATS_REGION domain-containing protein.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.998
H3GIW4_PHYRM	H3GKJ2_PHYRM	H3GIW4	H3GKJ2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.779
H3GIW4_PHYRM	H3GPC6_PHYRM	H3GIW4	H3GPC6	WD_REPEATS_REGION domain-containing protein.	Autophagy-related protein 3.	0.993
H3GIW4_PHYRM	H3GPE9_PHYRM	H3GIW4	H3GPE9	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.777
H3GIW4_PHYRM	H3GTH1_PHYRM	H3GIW4	H3GTH1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.828
H3GIW4_PHYRM	H3GY00_PHYRM	H3GIW4	H3GY00	WD_REPEATS_REGION domain-containing protein.	WW domain-containing protein.	0.828
H3GIW4_PHYRM	H3GYM4_PHYRM	H3GIW4	H3GYM4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.777
H3GIW4_PHYRM	H3H028_PHYRM	H3GIW4	H3H028	WD_REPEATS_REGION domain-containing protein.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.413
H3GIW4_PHYRM	H3H3A8_PHYRM	H3GIW4	H3H3A8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.779

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