(12 nodes) Mixed, incl. Ribonuclease MRP complex, and Protein-only RNase P network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G7D7_PHYRM	Protein kish; Involved in the early part of the secretory pathway. (76 aa)
	H3GEL8_PHYRM	Uncharacterized protein. (266 aa)
	H3GH19_PHYRM	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (128 aa)
	H3GHB7_PHYRM	Uncharacterized protein. (116 aa)
	H3GL41_PHYRM	Uncharacterized protein. (242 aa)
	H3GLG9_PHYRM	Uncharacterized protein. (828 aa)
	H3GNS7_PHYRM	Uncharacterized protein. (424 aa)
	H3GRC0_PHYRM	PRORP domain-containing protein. (572 aa)
	H3GTG3_PHYRM	Thioredoxin-like_fold domain-containing protein. (271 aa)
	H3GTG4_PHYRM	Uncharacterized protein. (224 aa)
	H3GYD8_PHYRM	Kri1_C domain-containing protein. (685 aa)
	H3H9B9_PHYRM	PRORP domain-containing protein. (572 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G7D7_PHYRM	H3GL41_PHYRM	H3G7D7	H3GL41	Protein kish; Involved in the early part of the secretory pathway.	Uncharacterized protein.	0.675
H3G7D7_PHYRM	H3GTG3_PHYRM	H3G7D7	H3GTG3	Protein kish; Involved in the early part of the secretory pathway.	Thioredoxin-like_fold domain-containing protein.	0.569
H3G7D7_PHYRM	H3GTG4_PHYRM	H3G7D7	H3GTG4	Protein kish; Involved in the early part of the secretory pathway.	Uncharacterized protein.	0.569
H3GEL8_PHYRM	H3GH19_PHYRM	H3GEL8	H3GH19	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.540
H3GEL8_PHYRM	H3GL41_PHYRM	H3GEL8	H3GL41	Uncharacterized protein.	Uncharacterized protein.	0.540
H3GEL8_PHYRM	H3GLG9_PHYRM	H3GEL8	H3GLG9	Uncharacterized protein.	Uncharacterized protein.	0.540
H3GEL8_PHYRM	H3GNS7_PHYRM	H3GEL8	H3GNS7	Uncharacterized protein.	Uncharacterized protein.	0.540
H3GH19_PHYRM	H3GEL8_PHYRM	H3GH19	H3GEL8	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Uncharacterized protein.	0.540
H3GH19_PHYRM	H3GHB7_PHYRM	H3GH19	H3GHB7	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Uncharacterized protein.	0.933
H3GH19_PHYRM	H3GL41_PHYRM	H3GH19	H3GL41	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Uncharacterized protein.	0.999
H3GH19_PHYRM	H3GLG9_PHYRM	H3GH19	H3GLG9	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Uncharacterized protein.	0.999
H3GH19_PHYRM	H3GNS7_PHYRM	H3GH19	H3GNS7	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Uncharacterized protein.	0.959
H3GH19_PHYRM	H3GRC0_PHYRM	H3GH19	H3GRC0	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	PRORP domain-containing protein.	0.872
H3GH19_PHYRM	H3GTG3_PHYRM	H3GH19	H3GTG3	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Thioredoxin-like_fold domain-containing protein.	0.897
H3GH19_PHYRM	H3GTG4_PHYRM	H3GH19	H3GTG4	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Uncharacterized protein.	0.897
H3GH19_PHYRM	H3GYD8_PHYRM	H3GH19	H3GYD8	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Kri1_C domain-containing protein.	0.971
H3GH19_PHYRM	H3H9B9_PHYRM	H3GH19	H3H9B9	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	PRORP domain-containing protein.	0.872
H3GHB7_PHYRM	H3GH19_PHYRM	H3GHB7	H3GH19	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.933
H3GHB7_PHYRM	H3GL41_PHYRM	H3GHB7	H3GL41	Uncharacterized protein.	Uncharacterized protein.	0.933
H3GHB7_PHYRM	H3GLG9_PHYRM	H3GHB7	H3GLG9	Uncharacterized protein.	Uncharacterized protein.	0.933

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