(35 nodes) Mixed, incl. Transmembrane signaling receptor activity, and Cytoplasmic side of plasma membrane network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G5K0_PHYRM	Protein kinase domain-containing protein. (68 aa)
	H3G6F2_PHYRM	Protein kinase domain-containing protein. (78 aa)
	H3G842_PHYRM	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (578 aa)
	H3G9J9_PHYRM	WD_REPEATS_REGION domain-containing protein. (344 aa)
	H3GA02_PHYRM	Uncharacterized protein. (355 aa)
	H3GD19_PHYRM	Protein kinase domain-containing protein. (227 aa)
	H3GG68_PHYRM	G_PROTEIN_RECEP_F3_4 domain-containing protein. (791 aa)
	H3GHC3_PHYRM	Protein kinase domain-containing protein. (722 aa)
	H3GI06_PHYRM	Uncharacterized protein. (339 aa)
	H3GI91_PHYRM	DUF4203 domain-containing protein. (312 aa)
	H3GIJ7_PHYRM	Uncharacterized protein. (280 aa)
	H3GJK1_PHYRM	Expansin-like EG45 domain-containing protein. (551 aa)
	H3GKB4_PHYRM	Uncharacterized protein. (320 aa)
	H3GN53_PHYRM	Uncharacterized protein. (883 aa)
	H3GQG0_PHYRM	Uncharacterized protein. (705 aa)
	H3GQG3_PHYRM	Uncharacterized protein. (232 aa)
	H3GQP0_PHYRM	Protein kinase domain-containing protein. (520 aa)
	H3GQP1_PHYRM	Protein kinase domain-containing protein. (523 aa)
	H3GVF7_PHYRM	Uncharacterized protein. (414 aa)
	H3GVN2_PHYRM	G_PROTEIN_RECEP_F3_4 domain-containing protein. (786 aa)
	H3GYT8_PHYRM	Uncharacterized protein. (616 aa)
	H3GZV9_PHYRM	Uncharacterized protein. (577 aa)
	H3GZZ6_PHYRM	Uncharacterized protein. (1396 aa)
	H3H046_PHYRM	Protein kinase domain-containing protein. (485 aa)
	H3H0P7_PHYRM	Uncharacterized protein. (883 aa)
	H3H1I6_PHYRM	Uncharacterized protein. (453 aa)
	H3H2F1_PHYRM	Uncharacterized protein. (1048 aa)
	H3H3Q5_PHYRM	G_PROTEIN_RECEP_F3_4 domain-containing protein. (631 aa)
	H3H449_PHYRM	Uncharacterized protein. (625 aa)
	H3HA39_PHYRM	Uncharacterized protein. (137 aa)
	H3HBC1_PHYRM	HTH psq-type domain-containing protein. (408 aa)
	H3HBG8_PHYRM	Uncharacterized protein. (1457 aa)
	H3HBT7_PHYRM	Uncharacterized protein. (1744 aa)
	H3HCQ0_PHYRM	Uncharacterized protein. (226 aa)
	H3HCR8_PHYRM	Uncharacterized protein. (498 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G6F2_PHYRM	H3G842_PHYRM	H3G6F2	H3G842	Protein kinase domain-containing protein.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.445
H3G6F2_PHYRM	H3G9J9_PHYRM	H3G6F2	H3G9J9	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.683
H3G6F2_PHYRM	H3GA02_PHYRM	H3G6F2	H3GA02	Protein kinase domain-containing protein.	Uncharacterized protein.	0.407
H3G6F2_PHYRM	H3GI06_PHYRM	H3G6F2	H3GI06	Protein kinase domain-containing protein.	Uncharacterized protein.	0.514
H3G6F2_PHYRM	H3GIJ7_PHYRM	H3G6F2	H3GIJ7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.456
H3G6F2_PHYRM	H3GKB4_PHYRM	H3G6F2	H3GKB4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.558
H3G6F2_PHYRM	H3GN53_PHYRM	H3G6F2	H3GN53	Protein kinase domain-containing protein.	Uncharacterized protein.	0.514
H3G6F2_PHYRM	H3GQP0_PHYRM	H3G6F2	H3GQP0	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.431
H3G6F2_PHYRM	H3GQP1_PHYRM	H3G6F2	H3GQP1	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.431
H3G6F2_PHYRM	H3GZZ6_PHYRM	H3G6F2	H3GZZ6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.451
H3G6F2_PHYRM	H3H046_PHYRM	H3G6F2	H3H046	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.431
H3G6F2_PHYRM	H3H0P7_PHYRM	H3G6F2	H3H0P7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.514
H3G6F2_PHYRM	H3HBG8_PHYRM	H3G6F2	H3HBG8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.445
H3G6F2_PHYRM	H3HCR8_PHYRM	H3G6F2	H3HCR8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.514
H3G842_PHYRM	H3G6F2_PHYRM	H3G842	H3G6F2	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Protein kinase domain-containing protein.	0.445
H3G842_PHYRM	H3GHC3_PHYRM	H3G842	H3GHC3	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Protein kinase domain-containing protein.	0.445
H3G842_PHYRM	H3GJK1_PHYRM	H3G842	H3GJK1	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Expansin-like EG45 domain-containing protein.	0.445
H3G842_PHYRM	H3GQG3_PHYRM	H3G842	H3GQG3	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Uncharacterized protein.	0.445
H3G842_PHYRM	H3GVF7_PHYRM	H3G842	H3GVF7	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Uncharacterized protein.	0.445
H3G842_PHYRM	H3HCQ0_PHYRM	H3G842	H3HCQ0	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Uncharacterized protein.	0.445

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