(7 nodes) Mixed, incl. Sulfite exporter TauE/SafE, and Regulation of lipid biosynthetic process network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G6A0_PHYRM	WD_REPEATS_REGION domain-containing protein. (367 aa)
	H3GNU5_PHYRM	Uncharacterized protein. (536 aa)
	H3GTF2_PHYRM	Uncharacterized protein. (459 aa)
	H3GXB4_PHYRM	Uncharacterized protein. (684 aa)
	H3H9R4_PHYRM	Uncharacterized protein. (162 aa)
	H3HAP5_PHYRM	Uncharacterized protein. (842 aa)
	H3HBG3_PHYRM	Uncharacterized protein. (439 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G6A0_PHYRM	H3GNU5_PHYRM	H3G6A0	H3GNU5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.680
H3G6A0_PHYRM	H3GTF2_PHYRM	H3G6A0	H3GTF2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.680
H3G6A0_PHYRM	H3GXB4_PHYRM	H3G6A0	H3GXB4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.742
H3G6A0_PHYRM	H3H9R4_PHYRM	H3G6A0	H3H9R4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.680
H3G6A0_PHYRM	H3HAP5_PHYRM	H3G6A0	H3HAP5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.680
H3G6A0_PHYRM	H3HBG3_PHYRM	H3G6A0	H3HBG3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.680
H3GNU5_PHYRM	H3G6A0_PHYRM	H3GNU5	H3G6A0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.680
H3GNU5_PHYRM	H3GTF2_PHYRM	H3GNU5	H3GTF2	Uncharacterized protein.	Uncharacterized protein.	0.598
H3GNU5_PHYRM	H3GXB4_PHYRM	H3GNU5	H3GXB4	Uncharacterized protein.	Uncharacterized protein.	0.540
H3GNU5_PHYRM	H3H9R4_PHYRM	H3GNU5	H3H9R4	Uncharacterized protein.	Uncharacterized protein.	0.577
H3GNU5_PHYRM	H3HAP5_PHYRM	H3GNU5	H3HAP5	Uncharacterized protein.	Uncharacterized protein.	0.609
H3GNU5_PHYRM	H3HBG3_PHYRM	H3GNU5	H3HBG3	Uncharacterized protein.	Uncharacterized protein.	0.622
H3GTF2_PHYRM	H3G6A0_PHYRM	H3GTF2	H3G6A0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.680
H3GTF2_PHYRM	H3GNU5_PHYRM	H3GTF2	H3GNU5	Uncharacterized protein.	Uncharacterized protein.	0.598
H3GTF2_PHYRM	H3GXB4_PHYRM	H3GTF2	H3GXB4	Uncharacterized protein.	Uncharacterized protein.	0.540
H3GTF2_PHYRM	H3H9R4_PHYRM	H3GTF2	H3H9R4	Uncharacterized protein.	Uncharacterized protein.	0.543
H3GTF2_PHYRM	H3HAP5_PHYRM	H3GTF2	H3HAP5	Uncharacterized protein.	Uncharacterized protein.	0.626
H3GTF2_PHYRM	H3HBG3_PHYRM	H3GTF2	H3HBG3	Uncharacterized protein.	Uncharacterized protein.	0.638
H3GXB4_PHYRM	H3G6A0_PHYRM	H3GXB4	H3G6A0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.742
H3GXB4_PHYRM	H3GNU5_PHYRM	H3GXB4	H3GNU5	Uncharacterized protein.	Uncharacterized protein.	0.540

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