(11 nodes) Mixed, incl. COMM domain, and Myb domain, plants network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GBT4_PHYRM	HTH myb-type domain-containing protein. (198 aa)
	H3GCS8_PHYRM	HTH myb-type domain-containing protein. (353 aa)
	H3GFT9_PHYRM	HTH myb-type domain-containing protein. (367 aa)
	H3GGU9_PHYRM	Uncharacterized protein. (1180 aa)
	H3GRX3_PHYRM	Uncharacterized protein. (618 aa)
	H3GSV9_PHYRM	COMM domain-containing protein. (213 aa)
	H3H177_PHYRM	KOG2701 domain-containing protein. (652 aa)
	H3HAU8_PHYRM	IFRD domain-containing protein. (391 aa)
	H3HB69_PHYRM	Uncharacterized protein. (522 aa)
	H3HBD5_PHYRM	COMM domain-containing protein. (328 aa)
	H3HCK5_PHYRM	HTH myb-type domain-containing protein. (167 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3GBT4_PHYRM	H3GFT9_PHYRM	H3GBT4	H3GFT9	HTH myb-type domain-containing protein.	HTH myb-type domain-containing protein.	0.457
H3GBT4_PHYRM	H3GRX3_PHYRM	H3GBT4	H3GRX3	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.627
H3GBT4_PHYRM	H3HAU8_PHYRM	H3GBT4	H3HAU8	HTH myb-type domain-containing protein.	IFRD domain-containing protein.	0.554
H3GBT4_PHYRM	H3HBD5_PHYRM	H3GBT4	H3HBD5	HTH myb-type domain-containing protein.	COMM domain-containing protein.	0.624
H3GCS8_PHYRM	H3GRX3_PHYRM	H3GCS8	H3GRX3	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.627
H3GCS8_PHYRM	H3HAU8_PHYRM	H3GCS8	H3HAU8	HTH myb-type domain-containing protein.	IFRD domain-containing protein.	0.554
H3GCS8_PHYRM	H3HBD5_PHYRM	H3GCS8	H3HBD5	HTH myb-type domain-containing protein.	COMM domain-containing protein.	0.624
H3GFT9_PHYRM	H3GBT4_PHYRM	H3GFT9	H3GBT4	HTH myb-type domain-containing protein.	HTH myb-type domain-containing protein.	0.457
H3GFT9_PHYRM	H3GRX3_PHYRM	H3GFT9	H3GRX3	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.627
H3GFT9_PHYRM	H3HAU8_PHYRM	H3GFT9	H3HAU8	HTH myb-type domain-containing protein.	IFRD domain-containing protein.	0.554
H3GFT9_PHYRM	H3HBD5_PHYRM	H3GFT9	H3HBD5	HTH myb-type domain-containing protein.	COMM domain-containing protein.	0.624
H3GGU9_PHYRM	H3GRX3_PHYRM	H3GGU9	H3GRX3	Uncharacterized protein.	Uncharacterized protein.	0.875
H3GGU9_PHYRM	H3GSV9_PHYRM	H3GGU9	H3GSV9	Uncharacterized protein.	COMM domain-containing protein.	0.809
H3GGU9_PHYRM	H3H177_PHYRM	H3GGU9	H3H177	Uncharacterized protein.	KOG2701 domain-containing protein.	0.881
H3GGU9_PHYRM	H3HB69_PHYRM	H3GGU9	H3HB69	Uncharacterized protein.	Uncharacterized protein.	0.735
H3GGU9_PHYRM	H3HBD5_PHYRM	H3GGU9	H3HBD5	Uncharacterized protein.	COMM domain-containing protein.	0.808
H3GRX3_PHYRM	H3GBT4_PHYRM	H3GRX3	H3GBT4	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.627
H3GRX3_PHYRM	H3GCS8_PHYRM	H3GRX3	H3GCS8	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.627
H3GRX3_PHYRM	H3GFT9_PHYRM	H3GRX3	H3GFT9	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.627
H3GRX3_PHYRM	H3GGU9_PHYRM	H3GRX3	H3GGU9	Uncharacterized protein.	Uncharacterized protein.	0.875

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