(125 nodes) GTP hydrolysis and joining of the 60S ribosomal subunit, and Potassium channel complex network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G4X4_PHYRM	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (215 aa)
	H3G4Y3_PHYRM	Uncharacterized protein. (50 aa)
	H3G538_PHYRM	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (71 aa)
	H3G550_PHYRM	HTH cro/C1-type domain-containing protein. (133 aa)
	H3G570_PHYRM	Tr-type G domain-containing protein. (433 aa)
	H3G589_PHYRM	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (63 aa)
	H3G5A1_PHYRM	Uncharacterized protein. (59 aa)
	H3G5A3_PHYRM	Uncharacterized protein. (93 aa)
	H3G5C7_PHYRM	Tr-type G domain-containing protein. (435 aa)
	H3G5F7_PHYRM	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (35 aa)
	H3G5G6_PHYRM	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (173 aa)
	H3G5G7_PHYRM	WD_REPEATS_REGION domain-containing protein. (317 aa)
	H3G5H7_PHYRM	Uncharacterized protein. (107 aa)
	H3G5I2_PHYRM	Uncharacterized protein. (51 aa)
	H3G5I3_PHYRM	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (101 aa)
	H3G5N0_PHYRM	Ribosomal_L7Ae domain-containing protein. (232 aa)
	H3G5X0_PHYRM	Uncharacterized protein. (36 aa)
	H3G5Z9_PHYRM	40S ribosomal protein S27. (79 aa)
	H3G699_PHYRM	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (203 aa)
	H3G6E7_PHYRM	EF1_GNE domain-containing protein. (92 aa)
	H3G6N3_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (148 aa)
	H3G6Q2_PHYRM	Tr-type G domain-containing protein. (592 aa)
	H3G6U9_PHYRM	Tr-type G domain-containing protein. (1042 aa)
	H3G6Y2_PHYRM	Ribos_L4_asso_C domain-containing protein. (368 aa)
	H3G703_PHYRM	Ribosomal protein L37; Binds to the 23S rRNA. (91 aa)
	H3G707_PHYRM	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (98 aa)
	H3G7J9_PHYRM	Uncharacterized protein. (626 aa)
	H3G7S0_PHYRM	Uncharacterized protein. (151 aa)
	H3G7U4_PHYRM	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (147 aa)
	H3G7X3_PHYRM	NAC-A/B domain-containing protein. (155 aa)
	H3G808_PHYRM	Uncharacterized protein. (112 aa)
	H3G844_PHYRM	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (104 aa)
	H3G850_PHYRM	S10_plectin domain-containing protein. (144 aa)
	H3G898_PHYRM	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (261 aa)
	H3G8A3_PHYRM	S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (139 aa)
	H3G8C3_PHYRM	Ribosomal_L18_c domain-containing protein. (300 aa)
	H3G8C7_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (169 aa)
	H3G8D4_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family. (203 aa)
	H3G8I7_PHYRM	Tr-type G domain-containing protein. (850 aa)
	H3G8P8_PHYRM	Uncharacterized protein. (154 aa)
	H3G8R9_PHYRM	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (406 aa)
	H3G8S1_PHYRM	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (206 aa)
	H3G8T5_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	H3G8T9_PHYRM	Ubiquitin-like domain-containing protein. (164 aa)
	H3G8V2_PHYRM	Nascent polypeptide-associated complex subunit beta. (162 aa)
	H3G8V5_PHYRM	Ubiquitin-like domain-containing protein. (128 aa)
	H3G8V6_PHYRM	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (192 aa)
	H3G8X7_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (181 aa)
	H3G8Y2_PHYRM	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (223 aa)
	H3G927_PHYRM	Ribosomal protein L10. (208 aa)
	H3G940_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (155 aa)
	H3G946_PHYRM	Uncharacterized protein. (123 aa)
	H3G962_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (141 aa)
	H3G973_PHYRM	Ribosomal_L2_C domain-containing protein. (256 aa)
	H3G980_PHYRM	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (206 aa)
	H3G993_PHYRM	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (318 aa)
	H3G997_PHYRM	Uncharacterized protein. (160 aa)
	H3G9A1_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (399 aa)
	H3G9D5_PHYRM	Uncharacterized protein. (111 aa)
	H3G9F0_PHYRM	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	H3G9F4_PHYRM	eRF1_1 domain-containing protein. (439 aa)
	H3G9L4_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	H3G9T2_PHYRM	KH type-2 domain-containing protein. (236 aa)
	H3G9U1_PHYRM	Ribosomal_L7Ae domain-containing protein. (112 aa)
	H3G9V9_PHYRM	Uncharacterized protein. (117 aa)
	H3G9W8_PHYRM	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (190 aa)
	H3GA04_PHYRM	Uncharacterized protein. (120 aa)
	H3GA40_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	H3GA71_PHYRM	Ribosomal_L7Ae domain-containing protein. (112 aa)
	H3GAC7_PHYRM	DLH domain-containing protein. (324 aa)
	H3GAD2_PHYRM	Uncharacterized protein. (135 aa)
	H3GAD4_PHYRM	Ribosomal_S17_N domain-containing protein. (152 aa)
	H3GAE0_PHYRM	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (138 aa)
	H3GAG5_PHYRM	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (104 aa)
	H3GAM0_PHYRM	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (222 aa)
	H3GAN1_PHYRM	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (137 aa)
	H3GAS8_PHYRM	Ribosomal_S10 domain-containing protein. (120 aa)
	H3GAY1_PHYRM	Ribosomal_S17_N domain-containing protein. (160 aa)
	H3GBJ1_PHYRM	BTB domain-containing protein. (945 aa)
	H3GBM4_PHYRM	Uncharacterized protein. (350 aa)
	H3GBQ2_PHYRM	Uncharacterized protein. (307 aa)
	H3GCC0_PHYRM	Uncharacterized protein. (110 aa)
	H3GCC1_PHYRM	Uncharacterized protein. (503 aa)
	H3GDP2_PHYRM	Ribosomal_L14e domain-containing protein. (135 aa)
	H3GE84_PHYRM	Rhomboid domain-containing protein. (193 aa)
	H3GEB4_PHYRM	Rhomboid domain-containing protein. (274 aa)
	H3GFM2_PHYRM	Uncharacterized protein. (339 aa)
	H3GFQ7_PHYRM	Ribosomal_L18e/L15P domain-containing protein. (192 aa)
	H3GG72_PHYRM	Uncharacterized protein. (156 aa)
	H3GGS5_PHYRM	Uncharacterized protein. (120 aa)
	H3GH26_PHYRM	TCTP domain-containing protein; Belongs to the TCTP family. (180 aa)
	H3GH28_PHYRM	WD_REPEATS_REGION domain-containing protein. (986 aa)
	H3GH83_PHYRM	Uncharacterized protein. (1038 aa)
	H3GI44_PHYRM	Uncharacterized protein. (776 aa)
	H3GIY1_PHYRM	Uncharacterized protein. (118 aa)
	H3GJ73_PHYRM	HABP4_PAI-RBP1 domain-containing protein. (334 aa)
	H3GL87_PHYRM	Uncharacterized protein. (244 aa)
	H3GNQ6_PHYRM	Ubiquitin-like domain-containing protein. (469 aa)
	H3GNV2_PHYRM	Uncharacterized protein. (144 aa)
	H3GPA7_PHYRM	Uncharacterized protein. (754 aa)
	H3GQX2_PHYRM	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (148 aa)
	H3GS86_PHYRM	Uncharacterized protein. (1205 aa)
	H3GU44_PHYRM	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	H3GV22_PHYRM	Uncharacterized protein. (773 aa)
	H3GVB5_PHYRM	Ion_trans domain-containing protein. (649 aa)
	H3GVB6_PHYRM	Uncharacterized protein. (661 aa)
	H3GVC9_PHYRM	Uncharacterized protein. (247 aa)
	H3GVD0_PHYRM	Ion_trans domain-containing protein. (439 aa)
	H3GXK3_PHYRM	Ribosomal_L28e domain-containing protein. (147 aa)
	H3GXW9_PHYRM	Uncharacterized protein. (125 aa)
	H3GZX7_PHYRM	Ribosomal_TL5_C domain-containing protein. (252 aa)
	H3H0X3_PHYRM	Uncharacterized protein. (1139 aa)
	H3H2X8_PHYRM	Uncharacterized protein. (246 aa)
	H3H4M3_PHYRM	Uncharacterized protein. (498 aa)
	H3H534_PHYRM	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	H3H9P8_PHYRM	Rhomboid domain-containing protein. (274 aa)
	H3HAW0_PHYRM	Uncharacterized protein. (1028 aa)
	H3HCD6_PHYRM	Uncharacterized protein. (189 aa)
	H3HCR2_PHYRM	Ion_trans domain-containing protein. (421 aa)
	H3HCU9_PHYRM	Uncharacterized protein. (317 aa)
	H3HCV1_PHYRM	Uncharacterized protein. (151 aa)
	H3HD62_PHYRM	Uncharacterized protein. (95 aa)
	H3HD87_PHYRM	Uncharacterized protein. (157 aa)
	H3HDR9_PHYRM	Uncharacterized protein. (264 aa)
	H3HE44_PHYRM	Uncharacterized protein. (976 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G4X4_PHYRM	H3G4Y3_PHYRM	H3G4X4	H3G4Y3	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.994
H3G4X4_PHYRM	H3G538_PHYRM	H3G4X4	H3G538	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.994
H3G4X4_PHYRM	H3G550_PHYRM	H3G4X4	H3G550	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	HTH cro/C1-type domain-containing protein.	0.884
H3G4X4_PHYRM	H3G570_PHYRM	H3G4X4	H3G570	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Tr-type G domain-containing protein.	0.828
H3G4X4_PHYRM	H3G589_PHYRM	H3G4X4	H3G589	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.986
H3G4X4_PHYRM	H3G5A1_PHYRM	H3G4X4	H3G5A1	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.995
H3G4X4_PHYRM	H3G5A3_PHYRM	H3G4X4	H3G5A3	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.957
H3G4X4_PHYRM	H3G5C7_PHYRM	H3G4X4	H3G5C7	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Tr-type G domain-containing protein.	0.714
H3G4X4_PHYRM	H3G5F7_PHYRM	H3G4X4	H3G5F7	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.985
H3G4X4_PHYRM	H3G5G6_PHYRM	H3G4X4	H3G5G6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.987
H3G4X4_PHYRM	H3G5G7_PHYRM	H3G4X4	H3G5G7	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	WD_REPEATS_REGION domain-containing protein.	0.950
H3G4X4_PHYRM	H3G5H7_PHYRM	H3G4X4	H3G5H7	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.876
H3G4X4_PHYRM	H3G5I2_PHYRM	H3G4X4	H3G5I2	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.981
H3G4X4_PHYRM	H3G5I3_PHYRM	H3G4X4	H3G5I3	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.995
H3G4X4_PHYRM	H3G5N0_PHYRM	H3G4X4	H3G5N0	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Ribosomal_L7Ae domain-containing protein.	0.979
H3G4X4_PHYRM	H3G5X0_PHYRM	H3G4X4	H3G5X0	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.979
H3G4X4_PHYRM	H3G5Z9_PHYRM	H3G4X4	H3G5Z9	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S27.	0.994
H3G4X4_PHYRM	H3G699_PHYRM	H3G4X4	H3G699	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.995
H3G4X4_PHYRM	H3G6E7_PHYRM	H3G4X4	H3G6E7	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	EF1_GNE domain-containing protein.	0.753
H3G4X4_PHYRM	H3G6N3_PHYRM	H3G4X4	H3G6N3	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.995

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