(10 nodes) Preribosome, small subunit precursor, and 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23-like network (Phytophthora ramorum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Predicted Interactions

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Your Input:
	H3G854_PHYRM	Uncharacterized protein. (380 aa)
	H3G8F2_PHYRM	KH domain-containing protein. (222 aa)
	H3G949_PHYRM	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (262 aa)
	H3G9Y2_PHYRM	Uncharacterized protein. (302 aa)
	H3GFH8_PHYRM	Methyltransf_25 domain-containing protein. (247 aa)
	H3GGE6_PHYRM	Protein kinase domain-containing protein. (496 aa)
	H3GNQ3_PHYRM	Bms1-type G domain-containing protein. (833 aa)
	H3GXQ9_PHYRM	Uncharacterized protein. (558 aa)
	H3H0E5_PHYRM	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (341 aa)
	H3HED0_PHYRM	RIO domain-containing protein. (409 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G854_PHYRM	H3G8F2_PHYRM	H3G854	H3G8F2	Uncharacterized protein.	KH domain-containing protein.	0.998
H3G854_PHYRM	H3G949_PHYRM	H3G854	H3G949	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
H3G854_PHYRM	H3G9Y2_PHYRM	H3G854	H3G9Y2	Uncharacterized protein.	Uncharacterized protein.	0.968
H3G854_PHYRM	H3GFH8_PHYRM	H3G854	H3GFH8	Uncharacterized protein.	Methyltransf_25 domain-containing protein.	0.968
H3G854_PHYRM	H3GGE6_PHYRM	H3G854	H3GGE6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.826
H3G854_PHYRM	H3GNQ3_PHYRM	H3G854	H3GNQ3	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.999
H3G854_PHYRM	H3GXQ9_PHYRM	H3G854	H3GXQ9	Uncharacterized protein.	Uncharacterized protein.	0.999
H3G854_PHYRM	H3H0E5_PHYRM	H3G854	H3H0E5	Uncharacterized protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.984
H3G854_PHYRM	H3HED0_PHYRM	H3G854	H3HED0	Uncharacterized protein.	RIO domain-containing protein.	0.997
H3G8F2_PHYRM	H3G854_PHYRM	H3G8F2	H3G854	KH domain-containing protein.	Uncharacterized protein.	0.998
H3G8F2_PHYRM	H3G949_PHYRM	H3G8F2	H3G949	KH domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.997
H3G8F2_PHYRM	H3G9Y2_PHYRM	H3G8F2	H3G9Y2	KH domain-containing protein.	Uncharacterized protein.	0.949
H3G8F2_PHYRM	H3GFH8_PHYRM	H3G8F2	H3GFH8	KH domain-containing protein.	Methyltransf_25 domain-containing protein.	0.949
H3G8F2_PHYRM	H3GGE6_PHYRM	H3G8F2	H3GGE6	KH domain-containing protein.	Protein kinase domain-containing protein.	0.921
H3G8F2_PHYRM	H3GNQ3_PHYRM	H3G8F2	H3GNQ3	KH domain-containing protein.	Bms1-type G domain-containing protein.	0.994
H3G8F2_PHYRM	H3GXQ9_PHYRM	H3G8F2	H3GXQ9	KH domain-containing protein.	Uncharacterized protein.	0.996
H3G8F2_PHYRM	H3H0E5_PHYRM	H3G8F2	H3H0E5	KH domain-containing protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.961
H3G8F2_PHYRM	H3HED0_PHYRM	H3G8F2	H3HED0	KH domain-containing protein.	RIO domain-containing protein.	0.996
H3G949_PHYRM	H3G854_PHYRM	H3G949	H3G854	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999
H3G949_PHYRM	H3G8F2_PHYRM	H3G949	H3G8F2	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	KH domain-containing protein.	0.997

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