(15 nodes) Prp19 complex, and Torus domain network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	H3G715_PHYRM	C3H1-type domain-containing protein. (206 aa)
	H3G7L1_PHYRM	Uncharacterized protein. (768 aa)
	H3G7Z2_PHYRM	SKIP_SNW domain-containing protein. (493 aa)
	H3G9F8_PHYRM	Uncharacterized protein. (693 aa)
	H3G9H3_PHYRM	Suf domain-containing protein. (864 aa)
	H3GAE9_PHYRM	WD_REPEATS_REGION domain-containing protein. (519 aa)
	H3GH72_PHYRM	Uncharacterized protein. (231 aa)
	H3GJ64_PHYRM	RRM domain-containing protein. (122 aa)
	H3GKM6_PHYRM	Uncharacterized protein. (229 aa)
	H3GLU5_PHYRM	DUF1716 domain-containing protein. (633 aa)
	H3GP75_PHYRM	Uncharacterized protein. (1448 aa)
	H3GPB1_PHYRM	Uncharacterized protein. (209 aa)
	H3H1I5_PHYRM	Uncharacterized protein. (213 aa)
	H3H995_PHYRM	WD_REPEATS_REGION domain-containing protein. (130 aa)
	H3HBV5_PHYRM	WD_REPEATS_REGION domain-containing protein. (515 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G715_PHYRM	H3G7L1_PHYRM	H3G715	H3G7L1	C3H1-type domain-containing protein.	Uncharacterized protein.	0.992
H3G715_PHYRM	H3G7Z2_PHYRM	H3G715	H3G7Z2	C3H1-type domain-containing protein.	SKIP_SNW domain-containing protein.	0.999
H3G715_PHYRM	H3G9F8_PHYRM	H3G715	H3G9F8	C3H1-type domain-containing protein.	Uncharacterized protein.	0.990
H3G715_PHYRM	H3G9H3_PHYRM	H3G715	H3G9H3	C3H1-type domain-containing protein.	Suf domain-containing protein.	0.999
H3G715_PHYRM	H3GAE9_PHYRM	H3G715	H3GAE9	C3H1-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.990
H3G715_PHYRM	H3GH72_PHYRM	H3G715	H3GH72	C3H1-type domain-containing protein.	Uncharacterized protein.	0.999
H3G715_PHYRM	H3GJ64_PHYRM	H3G715	H3GJ64	C3H1-type domain-containing protein.	RRM domain-containing protein.	0.992
H3G715_PHYRM	H3GKM6_PHYRM	H3G715	H3GKM6	C3H1-type domain-containing protein.	Uncharacterized protein.	0.935
H3G715_PHYRM	H3GLU5_PHYRM	H3G715	H3GLU5	C3H1-type domain-containing protein.	DUF1716 domain-containing protein.	0.620
H3G715_PHYRM	H3GP75_PHYRM	H3G715	H3GP75	C3H1-type domain-containing protein.	Uncharacterized protein.	0.997
H3G715_PHYRM	H3GPB1_PHYRM	H3G715	H3GPB1	C3H1-type domain-containing protein.	Uncharacterized protein.	0.999
H3G715_PHYRM	H3H1I5_PHYRM	H3G715	H3H1I5	C3H1-type domain-containing protein.	Uncharacterized protein.	0.969
H3G715_PHYRM	H3H995_PHYRM	H3G715	H3H995	C3H1-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.968
H3G715_PHYRM	H3HBV5_PHYRM	H3G715	H3HBV5	C3H1-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.968
H3G7L1_PHYRM	H3G715_PHYRM	H3G7L1	H3G715	Uncharacterized protein.	C3H1-type domain-containing protein.	0.992
H3G7L1_PHYRM	H3G7Z2_PHYRM	H3G7L1	H3G7Z2	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.989
H3G7L1_PHYRM	H3G9F8_PHYRM	H3G7L1	H3G9F8	Uncharacterized protein.	Uncharacterized protein.	0.978
H3G7L1_PHYRM	H3G9H3_PHYRM	H3G7L1	H3G9H3	Uncharacterized protein.	Suf domain-containing protein.	0.994
H3G7L1_PHYRM	H3GAE9_PHYRM	H3G7L1	H3GAE9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
H3G7L1_PHYRM	H3GH72_PHYRM	H3G7L1	H3GH72	Uncharacterized protein.	Uncharacterized protein.	0.983

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