42 items (Phytophthora ramorum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G4X2_PHYRM	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (454 aa)
	H3G5R3_PHYRM	Uncharacterized protein. (830 aa)
	H3G5Y3_PHYRM	Uncharacterized protein. (203 aa)
	H3G6G4_PHYRM	Uncharacterized protein. (185 aa)
	H3G6N7_PHYRM	RRM domain-containing protein. (49 aa)
	H3G6Y3_PHYRM	RRM domain-containing protein. (144 aa)
	H3G7G6_PHYRM	PWI domain-containing protein. (107 aa)
	H3G9L3_PHYRM	RRM domain-containing protein. (159 aa)
	H3G9Z6_PHYRM	Uncharacterized protein. (428 aa)
	H3GA17_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (406 aa)
	H3GCK6_PHYRM	WD_REPEATS_REGION domain-containing protein. (324 aa)
	H3GDV9_PHYRM	WD_REPEATS_REGION domain-containing protein. (397 aa)
	H3GDY4_PHYRM	Uncharacterized protein. (750 aa)
	H3GGA3_PHYRM	Uncharacterized protein. (358 aa)
	H3GH17_PHYRM	Uncharacterized protein. (224 aa)
	H3GHB6_PHYRM	Uncharacterized protein. (252 aa)
	H3GI16_PHYRM	Galectin. (522 aa)
	H3GIY2_PHYRM	Uncharacterized protein. (720 aa)
	H3GKN1_PHYRM	Uncharacterized protein. (342 aa)
	H3GMU6_PHYRM	RRM domain-containing protein. (230 aa)
	H3GP36_PHYRM	RRM domain-containing protein. (500 aa)
	H3GQ66_PHYRM	Uncharacterized protein. (333 aa)
	H3GQT3_PHYRM	Uncharacterized protein. (637 aa)
	H3GQW5_PHYRM	ABM domain-containing protein. (102 aa)
	H3GQW8_PHYRM	ABM domain-containing protein. (106 aa)
	H3GQW9_PHYRM	ABM domain-containing protein. (100 aa)
	H3GQX0_PHYRM	ABM domain-containing protein. (100 aa)
	H3GSA3_PHYRM	Uncharacterized protein. (462 aa)
	H3GTM2_PHYRM	Uncharacterized protein. (248 aa)
	H3GTU4_PHYRM	ABM domain-containing protein. (101 aa)
	H3GXE2_PHYRM	Methyltransf_FA domain-containing protein. (623 aa)
	H3H078_PHYRM	Uncharacterized protein. (397 aa)
	H3H1I3_PHYRM	Uncharacterized protein. (178 aa)
	H3H1R4_PHYRM	Uncharacterized protein. (716 aa)
	H3H2I9_PHYRM	Smg4_UPF3 domain-containing protein. (432 aa)
	H3H3U9_PHYRM	NmrA domain-containing protein. (293 aa)
	H3H705_PHYRM	Uncharacterized protein. (239 aa)
	H3HBV4_PHYRM	SAP domain-containing protein. (270 aa)
	H3HCL3_PHYRM	RRM domain-containing protein. (131 aa)
	H3HCT8_PHYRM	Uncharacterized protein. (149 aa)
	H3HDR1_PHYRM	PKS_AT domain-containing protein. (2008 aa)
	H3HEG7_PHYRM	RRM domain-containing protein. (285 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G4X2_PHYRM	H3G5Y3_PHYRM	H3G4X2	H3G5Y3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.434
H3G4X2_PHYRM	H3G6G4_PHYRM	H3G4X2	H3G6G4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.788
H3G4X2_PHYRM	H3GDY4_PHYRM	H3G4X2	H3GDY4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.727
H3G4X2_PHYRM	H3GHB6_PHYRM	H3G4X2	H3GHB6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.788
H3G4X2_PHYRM	H3GIY2_PHYRM	H3G4X2	H3GIY2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.727
H3G4X2_PHYRM	H3GQ66_PHYRM	H3G4X2	H3GQ66	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.405
H3G4X2_PHYRM	H3H078_PHYRM	H3G4X2	H3H078	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.932
H3G4X2_PHYRM	H3H1I3_PHYRM	H3G4X2	H3H1I3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.788
H3G4X2_PHYRM	H3H705_PHYRM	H3G4X2	H3H705	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.618
H3G4X2_PHYRM	H3HCL3_PHYRM	H3G4X2	H3HCL3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RRM domain-containing protein.	0.618
H3G5R3_PHYRM	H3G6G4_PHYRM	H3G5R3	H3G6G4	Uncharacterized protein.	Uncharacterized protein.	0.431
H3G5R3_PHYRM	H3G6N7_PHYRM	H3G5R3	H3G6N7	Uncharacterized protein.	RRM domain-containing protein.	0.514
H3G5R3_PHYRM	H3G6Y3_PHYRM	H3G5R3	H3G6Y3	Uncharacterized protein.	RRM domain-containing protein.	0.893
H3G5R3_PHYRM	H3G7G6_PHYRM	H3G5R3	H3G7G6	Uncharacterized protein.	PWI domain-containing protein.	0.925
H3G5R3_PHYRM	H3G9L3_PHYRM	H3G5R3	H3G9L3	Uncharacterized protein.	RRM domain-containing protein.	0.967
H3G5R3_PHYRM	H3G9Z6_PHYRM	H3G5R3	H3G9Z6	Uncharacterized protein.	Uncharacterized protein.	0.534
H3G5R3_PHYRM	H3GA17_PHYRM	H3G5R3	H3GA17	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.879
H3G5R3_PHYRM	H3GGA3_PHYRM	H3G5R3	H3GGA3	Uncharacterized protein.	Uncharacterized protein.	0.514
H3G5R3_PHYRM	H3GHB6_PHYRM	H3G5R3	H3GHB6	Uncharacterized protein.	Uncharacterized protein.	0.431
H3G5R3_PHYRM	H3GI16_PHYRM	H3G5R3	H3GI16	Uncharacterized protein.	Galectin.	0.514

page 1 of 55

Server load: low (18%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2025

Credits

Access

Info

About