(82 nodes) Multicellular organism development network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3HDS7_PHYRM	Non-specific serine/threonine protein kinase. (564 aa)
	H3HE38_PHYRM	Uncharacterized protein. (425 aa)
	H3G5C3_PHYRM	Uncharacterized protein; Belongs to the protein kinase superfamily. (300 aa)
	H3G5D7_PHYRM	Uncharacterized protein. (105 aa)
	H3G5D8_PHYRM	Uncharacterized protein; Belongs to the protein kinase superfamily. (299 aa)
	H3G7M2_PHYRM	Aida_C2 domain-containing protein. (134 aa)
	H3G8Q7_PHYRM	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (297 aa)
	H3GA28_PHYRM	WD_REPEATS_REGION domain-containing protein. (767 aa)
	H3GAK9_PHYRM	Uncharacterized protein. (111 aa)
	H3GAN0_PHYRM	Uncharacterized protein. (211 aa)
	H3GC82_PHYRM	Uncharacterized protein. (458 aa)
	H3GCD3_PHYRM	PHD-type domain-containing protein. (553 aa)
	H3GD04_PHYRM	Uncharacterized protein. (3007 aa)
	H3GDU3_PHYRM	Uncharacterized protein. (1909 aa)
	H3GDY0_PHYRM	Uncharacterized protein. (1890 aa)
	H3GE79_PHYRM	Uncharacterized protein. (171 aa)
	H3GFG6_PHYRM	Uncharacterized protein. (588 aa)
	H3GFG7_PHYRM	Uncharacterized protein. (583 aa)
	H3GGG0_PHYRM	SMN domain-containing protein. (231 aa)
	H3GGI9_PHYRM	TPR_REGION domain-containing protein. (907 aa)
	H3GGS3_PHYRM	Uncharacterized protein. (248 aa)
	H3GGV5_PHYRM	Uncharacterized protein. (512 aa)
	H3GGX9_PHYRM	Uncharacterized protein. (522 aa)
	H3GH84_PHYRM	Uncharacterized protein. (630 aa)
	H3GHM6_PHYRM	Uncharacterized protein. (228 aa)
	H3GIE6_PHYRM	ARID domain-containing protein. (675 aa)
	H3GIJ9_PHYRM	FHA domain-containing protein. (959 aa)
	H3GIZ3_PHYRM	SAM domain-containing protein. (333 aa)
	H3GJ85_PHYRM	Uncharacterized protein. (1513 aa)
	H3GK96_PHYRM	EGF-like domain-containing protein. (339 aa)
	H3GL69_PHYRM	CS domain-containing protein. (174 aa)
	H3GL77_PHYRM	Uncharacterized protein. (337 aa)
	H3GL80_PHYRM	SAM domain-containing protein. (197 aa)
	H3GLF1_PHYRM	Uncharacterized protein. (414 aa)
	H3GNE9_PHYRM	Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (537 aa)
	H3GNQ7_PHYRM	Uncharacterized protein. (1352 aa)
	H3GQ52_PHYRM	PDZ domain-containing protein. (597 aa)
	H3GQ95_PHYRM	Uncharacterized protein. (202 aa)
	H3GQM0_PHYRM	Protein kinase domain-containing protein. (485 aa)
	H3GQY1_PHYRM	LysM domain-containing protein. (186 aa)
	H3GRU2_PHYRM	GMP_PDE_delta domain-containing protein. (238 aa)
	H3GS76_PHYRM	Uncharacterized protein. (262 aa)
	H3GS84_PHYRM	Uncharacterized protein. (195 aa)
	H3GSF9_PHYRM	Uncharacterized protein. (1091 aa)
	H3GSW0_PHYRM	Glucanase; Belongs to the glycosyl hydrolase family 6. (766 aa)
	H3GSZ4_PHYRM	Uncharacterized protein. (1474 aa)
	H3GSZ9_PHYRM	Uncharacterized protein. (761 aa)
	H3GT38_PHYRM	Uncharacterized protein. (804 aa)
	H3GUD1_PHYRM	EF-hand domain-containing protein. (269 aa)
	H3GVI3_PHYRM	Uncharacterized protein. (520 aa)
	H3GVW3_PHYRM	TMF_TATA_bd domain-containing protein. (828 aa)
	H3GWC3_PHYRM	Uncharacterized protein. (407 aa)
	H3GWC4_PHYRM	Uncharacterized protein. (357 aa)
	H3GWI7_PHYRM	Uncharacterized protein. (282 aa)
	H3GX93_PHYRM	Uncharacterized protein. (346 aa)
	H3GXJ3_PHYRM	Uncharacterized protein. (786 aa)
	H3GYW1_PHYRM	Uncharacterized protein. (363 aa)
	H3GZG7_PHYRM	Uncharacterized protein. (639 aa)
	H3GZM5_PHYRM	Uncharacterized protein. (467 aa)
	H3H116_PHYRM	RING-type domain-containing protein. (398 aa)
	H3H1D5_PHYRM	Uncharacterized protein. (222 aa)
	H3H1L9_PHYRM	Uncharacterized protein. (185 aa)
	H3H257_PHYRM	Uncharacterized protein. (226 aa)
	H3H2Q0_PHYRM	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1712 aa)
	H3H3N3_PHYRM	BZIP domain-containing protein. (521 aa)
	H3H3N5_PHYRM	BZIP domain-containing protein. (511 aa)
	H3H3Z8_PHYRM	Uncharacterized protein. (2127 aa)
	H3H4P1_PHYRM	Uncharacterized protein. (927 aa)
	H3H720_PHYRM	C3H1-type domain-containing protein. (625 aa)
	H3HAT6_PHYRM	Uncharacterized protein. (898 aa)
	H3HAU9_PHYRM	Uncharacterized protein. (503 aa)
	H3HAV7_PHYRM	Uncharacterized protein. (399 aa)
	H3HAZ3_PHYRM	Uncharacterized protein. (1312 aa)
	H3HBB3_PHYRM	PHD domain-containing protein. (1044 aa)
	H3HBM7_PHYRM	Thioredoxin domain-containing protein. (272 aa)
	H3HBT7_PHYRM	Uncharacterized protein. (1744 aa)
	H3HCJ9_PHYRM	Uncharacterized protein. (121 aa)
	H3HCR0_PHYRM	Uncharacterized protein. (86 aa)
	H3HCZ3_PHYRM	Uncharacterized protein. (963 aa)
	H3HDG2_PHYRM	Uncharacterized protein. (310 aa)
	H3HDG3_PHYRM	Uncharacterized protein. (328 aa)
	H3HDG6_PHYRM	ANK_REP_REGION domain-containing protein. (163 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G5C3_PHYRM	H3GGI9_PHYRM	H3G5C3	H3GGI9	Uncharacterized protein; Belongs to the protein kinase superfamily.	TPR_REGION domain-containing protein.	0.520
H3G5C3_PHYRM	H3GQY1_PHYRM	H3G5C3	H3GQY1	Uncharacterized protein; Belongs to the protein kinase superfamily.	LysM domain-containing protein.	0.404
H3G5C3_PHYRM	H3HAU9_PHYRM	H3G5C3	H3HAU9	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.404
H3G5D8_PHYRM	H3G8Q7_PHYRM	H3G5D8	H3G8Q7	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.406
H3G5D8_PHYRM	H3GGI9_PHYRM	H3G5D8	H3GGI9	Uncharacterized protein; Belongs to the protein kinase superfamily.	TPR_REGION domain-containing protein.	0.520
H3G5D8_PHYRM	H3GQY1_PHYRM	H3G5D8	H3GQY1	Uncharacterized protein; Belongs to the protein kinase superfamily.	LysM domain-containing protein.	0.404
H3G5D8_PHYRM	H3HAU9_PHYRM	H3G5D8	H3HAU9	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.404
H3G8Q7_PHYRM	H3G5D8_PHYRM	H3G8Q7	H3G5D8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.406
H3G8Q7_PHYRM	H3GD04_PHYRM	H3G8Q7	H3GD04	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.570
H3G8Q7_PHYRM	H3GVI3_PHYRM	H3G8Q7	H3GVI3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.420
H3G8Q7_PHYRM	H3GZM5_PHYRM	H3G8Q7	H3GZM5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.570
H3G8Q7_PHYRM	H3HAZ3_PHYRM	H3G8Q7	H3HAZ3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.570
H3G8Q7_PHYRM	H3HBT7_PHYRM	H3G8Q7	H3HBT7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.570
H3G8Q7_PHYRM	H3HDS7_PHYRM	H3G8Q7	H3HDS7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.400
H3GA28_PHYRM	H3GGX9_PHYRM	H3GA28	H3GGX9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.992
H3GA28_PHYRM	H3GJ85_PHYRM	H3GA28	H3GJ85	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.949
H3GA28_PHYRM	H3GSZ4_PHYRM	H3GA28	H3GSZ4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.987
H3GA28_PHYRM	H3GSZ9_PHYRM	H3GA28	H3GSZ9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.970
H3GA28_PHYRM	H3GXJ3_PHYRM	H3GA28	H3GXJ3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.426
H3GA28_PHYRM	H3H3Z8_PHYRM	H3GA28	H3H3Z8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.970

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