(17 nodes) Acid-amino acid ligase activity network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Others

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co-expression

protein homology

Your Input:
	H3HCR5_PHYRM	Uncharacterized protein. (714 aa)
	H3HD10_PHYRM	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (1138 aa)
	H3HAW4_PHYRM	Uncharacterized protein. (313 aa)
	H3H115_PHYRM	Glutathione synthetase. (518 aa)
	H3H114_PHYRM	Uncharacterized protein. (153 aa)
	H3H030_PHYRM	Uncharacterized protein. (541 aa)
	H3GXU6_PHYRM	Mur_ligase_M domain-containing protein. (563 aa)
	H3GVQ8_PHYRM	Uncharacterized protein. (1142 aa)
	H3GRX0_PHYRM	Uncharacterized protein. (474 aa)
	H3GRE1_PHYRM	Uncharacterized protein. (1168 aa)
	H3GKR3_PHYRM	Uncharacterized protein. (657 aa)
	H3GHG7_PHYRM	Mur_ligase_M domain-containing protein. (564 aa)
	H3GCC3_PHYRM	Lipase_3 domain-containing protein. (908 aa)
	H3GAM8_PHYRM	Uncharacterized protein. (251 aa)
	H3G7E8_PHYRM	Uncharacterized protein. (649 aa)
	H3G675_PHYRM	Uncharacterized protein. (293 aa)
	H3G633_PHYRM	Uncharacterized protein. (375 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G7E8_PHYRM	H3H114_PHYRM	H3G7E8	H3H114	Uncharacterized protein.	Uncharacterized protein.	0.911
H3G7E8_PHYRM	H3H115_PHYRM	H3G7E8	H3H115	Uncharacterized protein.	Glutathione synthetase.	0.913
H3GAM8_PHYRM	H3GCC3_PHYRM	H3GAM8	H3GCC3	Uncharacterized protein.	Lipase_3 domain-containing protein.	0.718
H3GAM8_PHYRM	H3HD10_PHYRM	H3GAM8	H3HD10	Uncharacterized protein.	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	0.718
H3GCC3_PHYRM	H3GAM8_PHYRM	H3GCC3	H3GAM8	Lipase_3 domain-containing protein.	Uncharacterized protein.	0.718
H3GCC3_PHYRM	H3GHG7_PHYRM	H3GCC3	H3GHG7	Lipase_3 domain-containing protein.	Mur_ligase_M domain-containing protein.	0.588
H3GCC3_PHYRM	H3GXU6_PHYRM	H3GCC3	H3GXU6	Lipase_3 domain-containing protein.	Mur_ligase_M domain-containing protein.	0.588
H3GHG7_PHYRM	H3GCC3_PHYRM	H3GHG7	H3GCC3	Mur_ligase_M domain-containing protein.	Lipase_3 domain-containing protein.	0.588
H3GHG7_PHYRM	H3GXU6_PHYRM	H3GHG7	H3GXU6	Mur_ligase_M domain-containing protein.	Mur_ligase_M domain-containing protein.	0.916
H3GHG7_PHYRM	H3HD10_PHYRM	H3GHG7	H3HD10	Mur_ligase_M domain-containing protein.	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	0.588
H3GXU6_PHYRM	H3GCC3_PHYRM	H3GXU6	H3GCC3	Mur_ligase_M domain-containing protein.	Lipase_3 domain-containing protein.	0.588
H3GXU6_PHYRM	H3GHG7_PHYRM	H3GXU6	H3GHG7	Mur_ligase_M domain-containing protein.	Mur_ligase_M domain-containing protein.	0.916
H3GXU6_PHYRM	H3HD10_PHYRM	H3GXU6	H3HD10	Mur_ligase_M domain-containing protein.	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	0.588
H3H114_PHYRM	H3G7E8_PHYRM	H3H114	H3G7E8	Uncharacterized protein.	Uncharacterized protein.	0.911
H3H115_PHYRM	H3G7E8_PHYRM	H3H115	H3G7E8	Glutathione synthetase.	Uncharacterized protein.	0.913
H3HD10_PHYRM	H3GAM8_PHYRM	H3HD10	H3GAM8	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Uncharacterized protein.	0.718
H3HD10_PHYRM	H3GHG7_PHYRM	H3HD10	H3GHG7	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Mur_ligase_M domain-containing protein.	0.588
H3HD10_PHYRM	H3GXU6_PHYRM	H3HD10	H3GXU6	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Mur_ligase_M domain-containing protein.	0.588

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