(38 nodes) Carbohydrate binding network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GWS6_PHYRM	Uncharacterized protein. (191 aa)
	H3GW53_PHYRM	Uncharacterized protein. (327 aa)
	H3GVY9_PHYRM	Uncharacterized protein. (340 aa)
	H3GU87_PHYRM	Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (316 aa)
	H3GT35_PHYRM	Alpha-mannosidase. (1066 aa)
	H3GSF8_PHYRM	Fe2OG dioxygenase domain-containing protein. (315 aa)
	H3GN40_PHYRM	Uncharacterized protein. (355 aa)
	H3GN35_PHYRM	Uncharacterized protein. (528 aa)
	H3GMF4_PHYRM	Uncharacterized protein. (314 aa)
	H3GMD3_PHYRM	MYND-type domain-containing protein. (267 aa)
	H3GJ77_PHYRM	Uncharacterized protein. (463 aa)
	H3GJ38_PHYRM	L-type lectin-like domain-containing protein. (418 aa)
	H3GH39_PHYRM	DUF2012 domain-containing protein. (201 aa)
	H3GG96_PHYRM	Uncharacterized protein. (556 aa)
	H3GCT9_PHYRM	L-type lectin-like domain-containing protein. (416 aa)
	H3GCT8_PHYRM	L-type lectin-like domain-containing protein. (414 aa)
	H3GCT4_PHYRM	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (1020 aa)
	H3GCE8_PHYRM	CULT domain-containing protein. (366 aa)
	H3GC84_PHYRM	P4Hc domain-containing protein. (335 aa)
	H3GBV7_PHYRM	MYND-type domain-containing protein. (281 aa)
	H3GAT0_PHYRM	Uncharacterized protein. (344 aa)
	H3GAL8_PHYRM	Calreticulin. (426 aa)
	H3G6U6_PHYRM	Uncharacterized protein. (312 aa)
	H3G6I0_PHYRM	Glyco_hydro_38N domain-containing protein. (115 aa)
	H3GXV1_PHYRM	PRKCSH domain-containing protein. (444 aa)
	H3GY80_PHYRM	Uncharacterized protein. (692 aa)
	H3H179_PHYRM	Fe2OG dioxygenase domain-containing protein. (337 aa)
	H3H586_PHYRM	Uncharacterized protein. (552 aa)
	H3H599_PHYRM	Uncharacterized protein. (242 aa)
	H3H5V4_PHYRM	Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (322 aa)
	H3H6H8_PHYRM	Uncharacterized protein. (190 aa)
	H3H6N3_PHYRM	Uncharacterized protein. (232 aa)
	H3H6N4_PHYRM	Uncharacterized protein. (375 aa)
	H3H6N6_PHYRM	Uncharacterized protein. (132 aa)
	H3H988_PHYRM	DUF2012 domain-containing protein. (171 aa)
	H3H9X2_PHYRM	Uncharacterized protein. (188 aa)
	H3HAE2_PHYRM	Uncharacterized protein. (404 aa)
	H3HEG5_PHYRM	Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (300 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G6I0_PHYRM	H3HAE2_PHYRM	H3G6I0	H3HAE2	Glyco_hydro_38N domain-containing protein.	Uncharacterized protein.	0.947
H3G6U6_PHYRM	H3GCT4_PHYRM	H3G6U6	H3GCT4	Uncharacterized protein.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.558
H3GAL8_PHYRM	H3GCT4_PHYRM	H3GAL8	H3GCT4	Calreticulin.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.558
H3GAT0_PHYRM	H3GG96_PHYRM	H3GAT0	H3GG96	Uncharacterized protein.	Uncharacterized protein.	0.781
H3GAT0_PHYRM	H3GN35_PHYRM	H3GAT0	H3GN35	Uncharacterized protein.	Uncharacterized protein.	0.650
H3GAT0_PHYRM	H3GN40_PHYRM	H3GAT0	H3GN40	Uncharacterized protein.	Uncharacterized protein.	0.406
H3GAT0_PHYRM	H3GU87_PHYRM	H3GAT0	H3GU87	Uncharacterized protein.	Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.	0.750
H3GAT0_PHYRM	H3GY80_PHYRM	H3GAT0	H3GY80	Uncharacterized protein.	Uncharacterized protein.	0.521
H3GAT0_PHYRM	H3H586_PHYRM	H3GAT0	H3H586	Uncharacterized protein.	Uncharacterized protein.	0.537
H3GAT0_PHYRM	H3H5V4_PHYRM	H3GAT0	H3H5V4	Uncharacterized protein.	Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.	0.653
H3GAT0_PHYRM	H3H9X2_PHYRM	H3GAT0	H3H9X2	Uncharacterized protein.	Uncharacterized protein.	0.653
H3GAT0_PHYRM	H3HEG5_PHYRM	H3GAT0	H3HEG5	Uncharacterized protein.	Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.	0.781
H3GC84_PHYRM	H3GJ77_PHYRM	H3GC84	H3GJ77	P4Hc domain-containing protein.	Uncharacterized protein.	0.448
H3GCT4_PHYRM	H3G6U6_PHYRM	H3GCT4	H3G6U6	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.558
H3GCT4_PHYRM	H3GAL8_PHYRM	H3GCT4	H3GAL8	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	Calreticulin.	0.558
H3GCT8_PHYRM	H3GCT9_PHYRM	H3GCT8	H3GCT9	L-type lectin-like domain-containing protein.	L-type lectin-like domain-containing protein.	0.903
H3GCT8_PHYRM	H3GJ38_PHYRM	H3GCT8	H3GJ38	L-type lectin-like domain-containing protein.	L-type lectin-like domain-containing protein.	0.906
H3GCT9_PHYRM	H3GCT8_PHYRM	H3GCT9	H3GCT8	L-type lectin-like domain-containing protein.	L-type lectin-like domain-containing protein.	0.903
H3GCT9_PHYRM	H3GJ38_PHYRM	H3GCT9	H3GJ38	L-type lectin-like domain-containing protein.	L-type lectin-like domain-containing protein.	0.905
H3GG96_PHYRM	H3GAT0_PHYRM	H3GG96	H3GAT0	Uncharacterized protein.	Uncharacterized protein.	0.781

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