STRINGSTRING
H3GAL1_PHYRM H3GAL1_PHYRM H3GAA6_PHYRM H3GAA6_PHYRM H3GNQ3_PHYRM H3GNQ3_PHYRM H3GN45_PHYRM H3GN45_PHYRM H3GHE4_PHYRM H3GHE4_PHYRM H3G971_PHYRM H3G971_PHYRM H3G8P9_PHYRM H3G8P9_PHYRM H3G8N7_PHYRM H3G8N7_PHYRM H3G884_PHYRM H3G884_PHYRM H3G854_PHYRM H3G854_PHYRM H3G7J4_PHYRM H3G7J4_PHYRM H3G5Z0_PHYRM H3G5Z0_PHYRM H3G5X2_PHYRM H3G5X2_PHYRM H3GTR2_PHYRM H3GTR2_PHYRM H3H3X6_PHYRM H3H3X6_PHYRM H3H1J9_PHYRM H3H1J9_PHYRM H3H2A5_PHYRM H3H2A5_PHYRM H3H1H9_PHYRM H3H1H9_PHYRM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3GAL1_PHYRMWD_REPEATS_REGION domain-containing protein. (475 aa)
H3GAA6_PHYRMRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (148 aa)
H3GNQ3_PHYRMBms1-type G domain-containing protein. (833 aa)
H3GN45_PHYRMUncharacterized protein. (885 aa)
H3GHE4_PHYRMWD_REPEATS_REGION domain-containing protein. (920 aa)
H3G971_PHYRMS4 RNA-binding domain-containing protein. (184 aa)
H3G8P9_PHYRMNop domain-containing protein. (469 aa)
H3G8N7_PHYRMH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (180 aa)
H3G884_PHYRMBrix domain-containing protein. (287 aa)
H3G854_PHYRMUncharacterized protein. (380 aa)
H3G7J4_PHYRMUncharacterized protein. (61 aa)
H3G5Z0_PHYRMNop domain-containing protein. (462 aa)
H3G5X2_PHYRMNop domain-containing protein. (237 aa)
H3GTR2_PHYRMBms1-type G domain-containing protein. (1195 aa)
H3H3X6_PHYRMUncharacterized protein. (672 aa)
H3H1J9_PHYRMBP28CT domain-containing protein. (2093 aa)
H3H2A5_PHYRMWD_REPEATS_REGION domain-containing protein. (1043 aa)
H3H1H9_PHYRMUncharacterized protein. (820 aa)
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.