(18 nodes) Phosphatidylinositol bisphosphate phosphatase activity network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GG88_PHYRM	Uncharacterized protein. (1337 aa)
	H3GBP8_PHYRM	Uncharacterized protein. (356 aa)
	H3GBH0_PHYRM	Uncharacterized protein. (1564 aa)
	H3GXL3_PHYRM	FYVE-type domain-containing protein. (597 aa)
	H3GPE3_PHYRM	DUF1084 domain-containing protein. (1457 aa)
	H3GQY7_PHYRM	Uncharacterized protein. (2152 aa)
	H3GSF1_PHYRM	Uncharacterized protein. (1148 aa)
	H3HCJ5_PHYRM	Myotubularin phosphatase domain-containing protein. (796 aa)
	H3HE54_PHYRM	Uncharacterized protein. (872 aa)
	H3HDV3_PHYRM	Uncharacterized protein. (923 aa)
	H3HD54_PHYRM	Myotubularin phosphatase domain-containing protein. (1302 aa)
	H3HC09_PHYRM	SAC domain-containing protein. (1580 aa)
	H3GTT8_PHYRM	Uncharacterized protein. (1841 aa)
	H3GWS5_PHYRM	PH domain-containing protein. (1149 aa)
	H3GKU3_PHYRM	PH domain-containing protein. (1212 aa)
	H3GIQ1_PHYRM	Uncharacterized protein. (1358 aa)
	H3G7G1_PHYRM	Myotubularin phosphatase domain-containing protein. (404 aa)
	H3GG47_PHYRM	Uncharacterized protein. (1556 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G7G1_PHYRM	H3HC09_PHYRM	H3G7G1	H3HC09	Myotubularin phosphatase domain-containing protein.	SAC domain-containing protein.	0.913
H3GBH0_PHYRM	H3HC09_PHYRM	H3GBH0	H3HC09	Uncharacterized protein.	SAC domain-containing protein.	0.853
H3GBP8_PHYRM	H3HC09_PHYRM	H3GBP8	H3HC09	Uncharacterized protein.	SAC domain-containing protein.	0.853
H3GG47_PHYRM	H3HC09_PHYRM	H3GG47	H3HC09	Uncharacterized protein.	SAC domain-containing protein.	0.485
H3GG88_PHYRM	H3HC09_PHYRM	H3GG88	H3HC09	Uncharacterized protein.	SAC domain-containing protein.	0.900
H3GIQ1_PHYRM	H3HC09_PHYRM	H3GIQ1	H3HC09	Uncharacterized protein.	SAC domain-containing protein.	0.853
H3GKU3_PHYRM	H3HC09_PHYRM	H3GKU3	H3HC09	PH domain-containing protein.	SAC domain-containing protein.	0.485
H3GPE3_PHYRM	H3HC09_PHYRM	H3GPE3	H3HC09	DUF1084 domain-containing protein.	SAC domain-containing protein.	0.485
H3GQY7_PHYRM	H3HC09_PHYRM	H3GQY7	H3HC09	Uncharacterized protein.	SAC domain-containing protein.	0.485
H3GSF1_PHYRM	H3HC09_PHYRM	H3GSF1	H3HC09	Uncharacterized protein.	SAC domain-containing protein.	0.913
H3GTT8_PHYRM	H3HC09_PHYRM	H3GTT8	H3HC09	Uncharacterized protein.	SAC domain-containing protein.	0.485
H3GWS5_PHYRM	H3HC09_PHYRM	H3GWS5	H3HC09	PH domain-containing protein.	SAC domain-containing protein.	0.485
H3GXL3_PHYRM	H3HC09_PHYRM	H3GXL3	H3HC09	FYVE-type domain-containing protein.	SAC domain-containing protein.	0.551
H3HC09_PHYRM	H3G7G1_PHYRM	H3HC09	H3G7G1	SAC domain-containing protein.	Myotubularin phosphatase domain-containing protein.	0.913
H3HC09_PHYRM	H3GBH0_PHYRM	H3HC09	H3GBH0	SAC domain-containing protein.	Uncharacterized protein.	0.853
H3HC09_PHYRM	H3GBP8_PHYRM	H3HC09	H3GBP8	SAC domain-containing protein.	Uncharacterized protein.	0.853
H3HC09_PHYRM	H3GG47_PHYRM	H3HC09	H3GG47	SAC domain-containing protein.	Uncharacterized protein.	0.485
H3HC09_PHYRM	H3GG88_PHYRM	H3HC09	H3GG88	SAC domain-containing protein.	Uncharacterized protein.	0.900
H3HC09_PHYRM	H3GIQ1_PHYRM	H3HC09	H3GIQ1	SAC domain-containing protein.	Uncharacterized protein.	0.853
H3HC09_PHYRM	H3GKU3_PHYRM	H3HC09	H3GKU3	SAC domain-containing protein.	PH domain-containing protein.	0.485

page 1 of 2

Server load: low (30%) [HD]

Permalink

Network

Cooccurrence

Databases

Neighborhood

Textmining

Fusion

Experiments

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About