STRINGSTRING
H3GHD4_PHYRM H3GHD4_PHYRM H3G590_PHYRM H3G590_PHYRM H3G592_PHYRM H3G592_PHYRM H3G596_PHYRM H3G596_PHYRM LSM4 LSM4 H3G5R3_PHYRM H3G5R3_PHYRM H3G6A8_PHYRM H3G6A8_PHYRM H3G6P3_PHYRM H3G6P3_PHYRM H3G7K9_PHYRM H3G7K9_PHYRM H3G7Z9_PHYRM H3G7Z9_PHYRM H3G8P4_PHYRM H3G8P4_PHYRM H3G8R9_PHYRM H3G8R9_PHYRM H3G9L3_PHYRM H3G9L3_PHYRM H3G9T8_PHYRM H3G9T8_PHYRM H3G9Z9_PHYRM H3G9Z9_PHYRM H3GA64_PHYRM H3GA64_PHYRM H3GAM9_PHYRM H3GAM9_PHYRM FEN1 FEN1 H3GB12_PHYRM H3GB12_PHYRM H3GBG6_PHYRM H3GBG6_PHYRM H3GC58_PHYRM H3GC58_PHYRM H3GCB3_PHYRM H3GCB3_PHYRM H3GEP5_PHYRM H3GEP5_PHYRM H3GFI8_PHYRM H3GFI8_PHYRM H3GFP6_PHYRM H3GFP6_PHYRM H3GGQ2_PHYRM H3GGQ2_PHYRM LSM1 LSM1 H3GHE7_PHYRM H3GHE7_PHYRM H3GHN0_PHYRM H3GHN0_PHYRM H3GIZ3_PHYRM H3GIZ3_PHYRM H3GKN4_PHYRM H3GKN4_PHYRM H3GL78_PHYRM H3GL78_PHYRM H3GL80_PHYRM H3GL80_PHYRM H3GLK3_PHYRM H3GLK3_PHYRM H3GLT2_PHYRM H3GLT2_PHYRM H3GLZ7_PHYRM H3GLZ7_PHYRM H3GMZ6_PHYRM H3GMZ6_PHYRM H3GND3_PHYRM H3GND3_PHYRM H3GNK9_PHYRM H3GNK9_PHYRM H3GNM1_PHYRM H3GNM1_PHYRM H3GNS6_PHYRM H3GNS6_PHYRM H3GNX7_PHYRM H3GNX7_PHYRM H3GPS7_PHYRM H3GPS7_PHYRM H3GR32_PHYRM H3GR32_PHYRM H3GS78_PHYRM H3GS78_PHYRM H3GSI3_PHYRM H3GSI3_PHYRM H3GTA4_PHYRM H3GTA4_PHYRM H3GU84_PHYRM H3GU84_PHYRM H3GUF2_PHYRM H3GUF2_PHYRM H3GUH6_PHYRM H3GUH6_PHYRM H3GUY1_PHYRM H3GUY1_PHYRM H3GV34_PHYRM H3GV34_PHYRM H3GV42_PHYRM H3GV42_PHYRM H3GVR3_PHYRM H3GVR3_PHYRM H3GW85_PHYRM H3GW85_PHYRM H3GX87_PHYRM H3GX87_PHYRM H3GY73_PHYRM H3GY73_PHYRM H3GZ71_PHYRM H3GZ71_PHYRM H3GZE2_PHYRM H3GZE2_PHYRM H3GZH3_PHYRM H3GZH3_PHYRM H3GZT5_PHYRM H3GZT5_PHYRM H3H0N0_PHYRM H3H0N0_PHYRM H3H0P3_PHYRM H3H0P3_PHYRM H3H0V6_PHYRM H3H0V6_PHYRM H3H0Y8_PHYRM H3H0Y8_PHYRM H3H1H3_PHYRM H3H1H3_PHYRM H3H1Q6_PHYRM H3H1Q6_PHYRM H3H263_PHYRM H3H263_PHYRM H3H2I9_PHYRM H3H2I9_PHYRM H3H315_PHYRM H3H315_PHYRM H3H380_PHYRM H3H380_PHYRM H3H3A9_PHYRM H3H3A9_PHYRM H3H3B0_PHYRM H3H3B0_PHYRM H3H3C2_PHYRM H3H3C2_PHYRM H3H6I3_PHYRM H3H6I3_PHYRM H3H6W3_PHYRM H3H6W3_PHYRM H3H724_PHYRM H3H724_PHYRM H3H7Q1_PHYRM H3H7Q1_PHYRM H3H843_PHYRM H3H843_PHYRM H3H8K4_PHYRM H3H8K4_PHYRM H3HA42_PHYRM H3HA42_PHYRM H3HAS6_PHYRM H3HAS6_PHYRM H3HB56_PHYRM H3HB56_PHYRM H3HBA3_PHYRM H3HBA3_PHYRM H3HC96_PHYRM H3HC96_PHYRM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3GHD4_PHYRMRPOL4c domain-containing protein. (155 aa)
H3G590_PHYRMS1 motif domain-containing protein. (703 aa)
H3G592_PHYRMRNB domain-containing protein. (187 aa)
H3G596_PHYRMUncharacterized protein. (248 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (118 aa)
H3G5R3_PHYRMUncharacterized protein. (830 aa)
H3G6A8_PHYRMUncharacterized protein. (653 aa)
H3G6P3_PHYRMUncharacterized protein. (267 aa)
H3G7K9_PHYRMUncharacterized protein. (336 aa)
H3G7Z9_PHYRMRibonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (199 aa)
H3G8P4_PHYRMSm domain-containing protein. (105 aa)
H3G8R9_PHYRMProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (406 aa)
H3G9L3_PHYRMRRM domain-containing protein. (159 aa)
H3G9T8_PHYRMS1 domain-containing protein. (290 aa)
H3G9Z9_PHYRMInosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (190 aa)
H3GA64_PHYRMRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (234 aa)
H3GAM9_PHYRMPNP_UDP_1 domain-containing protein. (303 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (392 aa)
H3GB12_PHYRMUncharacterized protein. (267 aa)
H3GBG6_PHYRMUncharacterized protein. (245 aa)
H3GC58_PHYRMUncharacterized protein; Belongs to the RNase T2 family. (312 aa)
H3GCB3_PHYRMUncharacterized protein. (295 aa)
H3GEP5_PHYRMUncharacterized protein. (1066 aa)
H3GFI8_PHYRMTPR_REGION domain-containing protein. (693 aa)
H3GFP6_PHYRMmRNA_decap_C domain-containing protein. (319 aa)
H3GGQ2_PHYRMFibronectin type-III domain-containing protein. (601 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (122 aa)
H3GHE7_PHYRMPhosphodiesterase. (1137 aa)
H3GHN0_PHYRMRNase_H2-Ydr279 domain-containing protein. (311 aa)
H3GIZ3_PHYRMSAM domain-containing protein. (333 aa)
H3GKN4_PHYRMRNase_PH domain-containing protein. (601 aa)
H3GL78_PHYRMRAI1 domain-containing protein. (331 aa)
H3GL80_PHYRMSAM domain-containing protein. (197 aa)
H3GLK3_PHYRMMoCF_biosynth domain-containing protein. (1405 aa)
H3GLT2_PHYRMUncharacterized protein. (670 aa)
H3GLZ7_PHYRMUncharacterized protein. (1357 aa)
H3GMZ6_PHYRMUncharacterized protein. (625 aa)
H3GND3_PHYRMUncharacterized protein. (1612 aa)
H3GNK9_PHYRMUncharacterized protein. (168 aa)
H3GNM1_PHYRMNudix hydrolase domain-containing protein. (429 aa)
H3GNS6_PHYRMUncharacterized protein. (1462 aa)
H3GNX7_PHYRMUncharacterized protein; Belongs to the RNase T2 family. (246 aa)
H3GPS7_PHYRMHD_domain domain-containing protein. (461 aa)
H3GR32_PHYRMUncharacterized protein; Belongs to the RNase T2 family. (345 aa)
H3GS78_PHYRMCyclic nucleotide-binding domain-containing protein. (655 aa)
H3GSI3_PHYRM5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1001 aa)
H3GTA4_PHYRMEndo/exonuclease/phosphatase domain-containing protein. (578 aa)
H3GU84_PHYRMHD domain-containing protein. (586 aa)
H3GUF2_PHYRMUncharacterized protein. (466 aa)
H3GUH6_PHYRMRNB domain-containing protein; Belongs to the RNR ribonuclease family. (1089 aa)
H3GUY1_PHYRMUncharacterized protein. (2738 aa)
H3GV34_PHYRMUncharacterized protein. (252 aa)
H3GV42_PHYRMHD domain-containing protein. (199 aa)
H3GVR3_PHYRMUncharacterized protein; Belongs to the GDA1/CD39 NTPase family. (579 aa)
H3GW85_PHYRMRibonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (299 aa)
H3GX87_PHYRMUncharacterized protein. (282 aa)
H3GY73_PHYRMIU_nuc_hydro domain-containing protein. (321 aa)
H3GZ71_PHYRMRNB domain-containing protein. (507 aa)
H3GZE2_PHYRMERCC4 domain-containing protein. (567 aa)
H3GZH3_PHYRMUncharacterized protein. (472 aa)
H3GZT5_PHYRMEndo/exonuclease/phosphatase domain-containing protein. (318 aa)
H3H0N0_PHYRMUncharacterized protein; Belongs to the 5'-nucleotidase family. (521 aa)
H3H0P3_PHYRMUncharacterized protein. (276 aa)
H3H0V6_PHYRMUncharacterized protein. (455 aa)
H3H0Y8_PHYRMUncharacterized protein. (523 aa)
H3H1H3_PHYRMUncharacterized protein. (864 aa)
H3H1Q6_PHYRMUncharacterized protein; Belongs to the 5'-nucleotidase family. (523 aa)
H3H263_PHYRMPPM-type phosphatase domain-containing protein. (480 aa)
H3H2I9_PHYRMSmg4_UPF3 domain-containing protein. (432 aa)
H3H315_PHYRMNudix hydrolase domain-containing protein. (341 aa)
H3H380_PHYRMPNP_UDP_1 domain-containing protein. (431 aa)
H3H3A9_PHYRMEndo/exonuclease/phosphatase domain-containing protein. (328 aa)
H3H3B0_PHYRMEndo/exonuclease/phosphatase domain-containing protein. (299 aa)
H3H3C2_PHYRMEndo/exonuclease/phosphatase domain-containing protein. (464 aa)
H3H6I3_PHYRMUncharacterized protein. (132 aa)
H3H6W3_PHYRMNOT2_3_5 domain-containing protein. (435 aa)
H3H724_PHYRMNot3 domain-containing protein. (737 aa)
H3H7Q1_PHYRMUncharacterized protein. (1045 aa)
H3H843_PHYRMRNB domain-containing protein. (735 aa)
H3H8K4_PHYRMUncharacterized protein. (208 aa)
H3HA42_PHYRMHRDC domain-containing protein. (723 aa)
H3HAS6_PHYRMUncharacterized protein; Belongs to the RNase T2 family. (360 aa)
H3HB56_PHYRMUncharacterized protein. (602 aa)
H3HBA3_PHYRMRNB domain-containing protein; Belongs to the RNR ribonuclease family. (1186 aa)
H3HC96_PHYRMUncharacterized protein. (220 aa)
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.