(42 nodes) Unfolded protein binding network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GMC6_PHYRM	CIA30 domain-containing protein. (267 aa)
	H3GBY5_PHYRM	Uncharacterized protein. (1678 aa)
	H3GB16_PHYRM	T-complex protein 1 subunit gamma. (530 aa)
	H3GAV5_PHYRM	Uncharacterized protein; Belongs to the TCP-1 chaperonin family. (170 aa)
	H3GAL8_PHYRM	Calreticulin. (426 aa)
	H3GA85_PHYRM	T-complex protein 1 subunit delta. (533 aa)
	H3G7V3_PHYRM	Uncharacterized protein. (395 aa)
	H3G7X3_PHYRM	NAC-A/B domain-containing protein. (155 aa)
	H3GA03_PHYRM	Uncharacterized protein. (422 aa)
	H3G860_PHYRM	Uncharacterized protein; Belongs to the heat shock protein 70 family. (654 aa)
	H3G897_PHYRM	Uncharacterized protein. (526 aa)
	H3G8C0_PHYRM	Uncharacterized protein; Belongs to the heat shock protein 70 family. (633 aa)
	H3G966_PHYRM	Heat shock protein 90. (705 aa)
	H3G982_PHYRM	Uncharacterized protein. (546 aa)
	H3G985_PHYRM	Uncharacterized protein. (541 aa)
	H3G986_PHYRM	Uncharacterized protein. (545 aa)
	H3G9K3_PHYRM	Uncharacterized protein. (536 aa)
	H3G6U6_PHYRM	Uncharacterized protein. (312 aa)
	H3G6V9_PHYRM	Uncharacterized protein. (70 aa)
	H3G733_PHYRM	Uncharacterized protein. (140 aa)
	H3G7A3_PHYRM	Uncharacterized protein; Belongs to the GroES chaperonin family. (99 aa)
	H3G7T2_PHYRM	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (533 aa)
	H3GXH9_PHYRM	Na_H_antiporter domain-containing protein. (1674 aa)
	H3GTM8_PHYRM	Uncharacterized protein. (392 aa)
	H3GRS3_PHYRM	Uncharacterized protein. (129 aa)
	H3GRF5_PHYRM	DUF4209 domain-containing protein. (968 aa)
	H3GPN0_PHYRM	Uncharacterized protein. (254 aa)
	H3GMN2_PHYRM	Uncharacterized protein. (166 aa)
	H3GI55_PHYRM	Uncharacterized protein. (152 aa)
	H3GYH4_PHYRM	Uncharacterized protein. (127 aa)
	H3GYY2_PHYRM	Uncharacterized protein. (314 aa)
	H3H2J8_PHYRM	Uncharacterized protein. (554 aa)
	H3H6X9_PHYRM	Uncharacterized protein; Belongs to the TCP-1 chaperonin family. (190 aa)
	H3HBE4_PHYRM	CS domain-containing protein. (518 aa)
	H3HBW7_PHYRM	Uncharacterized protein. (367 aa)
	H3HC02_PHYRM	Uncharacterized protein. (1495 aa)
	H3HD16_PHYRM	CS domain-containing protein. (202 aa)
	H3HDI8_PHYRM	DUF3342 domain-containing protein. (662 aa)
	H3GFN0_PHYRM	N-acetyltransferase domain-containing protein. (353 aa)
	H3GFM7_PHYRM	Uncharacterized protein. (373 aa)
	H3GCK5_PHYRM	HATPase_c domain-containing protein. (849 aa)
	H3GCH9_PHYRM	Uncharacterized protein. (685 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G6U6_PHYRM	H3G7V3_PHYRM	H3G6U6	H3G7V3	Uncharacterized protein.	Uncharacterized protein.	0.883
H3G6U6_PHYRM	H3G860_PHYRM	H3G6U6	H3G860	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.883
H3G6U6_PHYRM	H3G8C0_PHYRM	H3G6U6	H3G8C0	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.417
H3G6U6_PHYRM	H3G966_PHYRM	H3G6U6	H3G966	Uncharacterized protein.	Heat shock protein 90.	0.776
H3G6U6_PHYRM	H3GCH9_PHYRM	H3G6U6	H3GCH9	Uncharacterized protein.	Uncharacterized protein.	0.776
H3G6U6_PHYRM	H3GCK5_PHYRM	H3G6U6	H3GCK5	Uncharacterized protein.	HATPase_c domain-containing protein.	0.961
H3G6U6_PHYRM	H3GXH9_PHYRM	H3G6U6	H3GXH9	Uncharacterized protein.	Na_H_antiporter domain-containing protein.	0.417
H3G6U6_PHYRM	H3H2J8_PHYRM	H3G6U6	H3H2J8	Uncharacterized protein.	Uncharacterized protein.	0.923
H3G6U6_PHYRM	H3HC02_PHYRM	H3G6U6	H3HC02	Uncharacterized protein.	Uncharacterized protein.	0.431
H3G733_PHYRM	H3G7T2_PHYRM	H3G733	H3G7T2	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.795
H3G733_PHYRM	H3G897_PHYRM	H3G733	H3G897	Uncharacterized protein.	Uncharacterized protein.	0.801
H3G733_PHYRM	H3G982_PHYRM	H3G733	H3G982	Uncharacterized protein.	Uncharacterized protein.	0.636
H3G733_PHYRM	H3G985_PHYRM	H3G733	H3G985	Uncharacterized protein.	Uncharacterized protein.	0.786
H3G733_PHYRM	H3G986_PHYRM	H3G733	H3G986	Uncharacterized protein.	Uncharacterized protein.	0.681
H3G733_PHYRM	H3G9K3_PHYRM	H3G733	H3G9K3	Uncharacterized protein.	Uncharacterized protein.	0.641
H3G733_PHYRM	H3GA85_PHYRM	H3G733	H3GA85	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.834
H3G733_PHYRM	H3GAV5_PHYRM	H3G733	H3GAV5	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.641
H3G733_PHYRM	H3GB16_PHYRM	H3G733	H3GB16	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.622
H3G733_PHYRM	H3GMN2_PHYRM	H3G733	H3GMN2	Uncharacterized protein.	Uncharacterized protein.	0.681
H3G733_PHYRM	H3GRF5_PHYRM	H3G733	H3GRF5	Uncharacterized protein.	DUF4209 domain-containing protein.	0.622

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