(32 nodes) Mitotic nuclear division network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GM55_PHYRM	Uncharacterized protein. (1094 aa)
	H3GMA8_PHYRM	Uncharacterized protein. (177 aa)
	H3GMC3_PHYRM	C2H2-type domain-containing protein. (292 aa)
	H3GMN9_PHYRM	Cnd1 domain-containing protein. (1561 aa)
	H3GP79_PHYRM	Uncharacterized protein. (165 aa)
	H3GQI1_PHYRM	Uncharacterized protein. (228 aa)
	H3GU83_PHYRM	Uncharacterized protein. (170 aa)
	H3GWJ2_PHYRM	Uncharacterized protein. (393 aa)
	H3GYE1_PHYRM	Uncharacterized protein. (1187 aa)
	H3GYX6_PHYRM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (242 aa)
	H3GZ40_PHYRM	CLASP_N domain-containing protein. (380 aa)
	H3GZQ0_PHYRM	Uncharacterized protein. (327 aa)
	H3H3Y4_PHYRM	Uncharacterized protein. (1051 aa)
	H3H563_PHYRM	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1331 aa)
	H3HAM4_PHYRM	TOG domain-containing protein. (927 aa)
	H3HB63_PHYRM	CLASP_N domain-containing protein. (218 aa)
	H3G5X3_PHYRM	SMC_N domain-containing protein. (228 aa)
	H3HB64_PHYRM	Uncharacterized protein. (167 aa)
	H3HBF3_PHYRM	Sister chromatid cohesion protein. (272 aa)
	H3HC97_PHYRM	SMC hinge domain-containing protein. (1646 aa)
	H3G6H1_PHYRM	Structural maintenance of chromosomes protein. (1179 aa)
	H3G6M9_PHYRM	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (252 aa)
	H3GBC8_PHYRM	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1642 aa)
	H3GCH0_PHYRM	Uncharacterized protein. (600 aa)
	H3GDA7_PHYRM	Cnd3 domain-containing protein. (1150 aa)
	H3GF21_PHYRM	Uncharacterized protein. (1059 aa)
	H3GF23_PHYRM	Uncharacterized protein. (1242 aa)
	H3GHB0_PHYRM	Uncharacterized protein. (318 aa)
	H3GHV9_PHYRM	Structural maintenance of chromosomes protein. (1330 aa)
	H3GI68_PHYRM	N-acetyltransferase domain-containing protein. (314 aa)
	H3GJE0_PHYRM	Uncharacterized protein. (1463 aa)
	H3GLQ8_PHYRM	Uncharacterized protein. (111 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G5X3_PHYRM	H3G6H1_PHYRM	H3G5X3	H3G6H1	SMC_N domain-containing protein.	Structural maintenance of chromosomes protein.	0.832
H3G5X3_PHYRM	H3GCH0_PHYRM	H3G5X3	H3GCH0	SMC_N domain-containing protein.	Uncharacterized protein.	0.552
H3G5X3_PHYRM	H3GDA7_PHYRM	H3G5X3	H3GDA7	SMC_N domain-containing protein.	Cnd3 domain-containing protein.	0.885
H3G5X3_PHYRM	H3GF21_PHYRM	H3G5X3	H3GF21	SMC_N domain-containing protein.	Uncharacterized protein.	0.725
H3G5X3_PHYRM	H3GF23_PHYRM	H3G5X3	H3GF23	SMC_N domain-containing protein.	Uncharacterized protein.	0.725
H3G5X3_PHYRM	H3GHB0_PHYRM	H3G5X3	H3GHB0	SMC_N domain-containing protein.	Uncharacterized protein.	0.937
H3G5X3_PHYRM	H3GHV9_PHYRM	H3G5X3	H3GHV9	SMC_N domain-containing protein.	Structural maintenance of chromosomes protein.	0.656
H3G5X3_PHYRM	H3GI68_PHYRM	H3G5X3	H3GI68	SMC_N domain-containing protein.	N-acetyltransferase domain-containing protein.	0.976
H3G5X3_PHYRM	H3GJE0_PHYRM	H3G5X3	H3GJE0	SMC_N domain-containing protein.	Uncharacterized protein.	0.984
H3G5X3_PHYRM	H3GLQ8_PHYRM	H3G5X3	H3GLQ8	SMC_N domain-containing protein.	Uncharacterized protein.	0.539
H3G5X3_PHYRM	H3GM55_PHYRM	H3G5X3	H3GM55	SMC_N domain-containing protein.	Uncharacterized protein.	0.771
H3G5X3_PHYRM	H3GMN9_PHYRM	H3G5X3	H3GMN9	SMC_N domain-containing protein.	Cnd1 domain-containing protein.	0.795
H3G5X3_PHYRM	H3GP79_PHYRM	H3G5X3	H3GP79	SMC_N domain-containing protein.	Uncharacterized protein.	0.552
H3G5X3_PHYRM	H3GWJ2_PHYRM	H3G5X3	H3GWJ2	SMC_N domain-containing protein.	Uncharacterized protein.	0.479
H3G5X3_PHYRM	H3H3Y4_PHYRM	H3G5X3	H3H3Y4	SMC_N domain-containing protein.	Uncharacterized protein.	0.888
H3G5X3_PHYRM	H3H563_PHYRM	H3G5X3	H3H563	SMC_N domain-containing protein.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.897
H3G5X3_PHYRM	H3HBF3_PHYRM	H3G5X3	H3HBF3	SMC_N domain-containing protein.	Sister chromatid cohesion protein.	0.937
H3G5X3_PHYRM	H3HC97_PHYRM	H3G5X3	H3HC97	SMC_N domain-containing protein.	SMC hinge domain-containing protein.	0.543
H3G6H1_PHYRM	H3G5X3_PHYRM	H3G6H1	H3G5X3	Structural maintenance of chromosomes protein.	SMC_N domain-containing protein.	0.832
H3G6H1_PHYRM	H3GBC8_PHYRM	H3G6H1	H3GBC8	Structural maintenance of chromosomes protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.851

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