(24 nodes) Cellular response to oxygen-containing compound network (Phytophthora ramorum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G5C3_PHYRM	Uncharacterized protein; Belongs to the protein kinase superfamily. (300 aa)
	H3G5D8_PHYRM	Uncharacterized protein; Belongs to the protein kinase superfamily. (299 aa)
	H3G5V9_PHYRM	MFS domain-containing protein. (429 aa)
	H3G5W0_PHYRM	MFS domain-containing protein. (417 aa)
	H3G5Z2_PHYRM	WD_REPEATS_REGION domain-containing protein. (1226 aa)
	H3G783_PHYRM	Uncharacterized protein. (321 aa)
	H3G7G0_PHYRM	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (197 aa)
	H3G948_PHYRM	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (213 aa)
	H3G9J7_PHYRM	Sod_Cu domain-containing protein. (155 aa)
	H3G9N0_PHYRM	S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (282 aa)
	H3GAN0_PHYRM	Uncharacterized protein. (211 aa)
	H3GF20_PHYRM	Uncharacterized protein. (348 aa)
	H3GGE2_PHYRM	Uncharacterized protein. (572 aa)
	H3GKC5_PHYRM	MFS domain-containing protein. (507 aa)
	H3GKC8_PHYRM	MFS domain-containing protein. (501 aa)
	H3GKC9_PHYRM	MFS domain-containing protein. (550 aa)
	H3GVI3_PHYRM	Uncharacterized protein. (520 aa)
	H3H3N3_PHYRM	BZIP domain-containing protein. (521 aa)
	H3H3N5_PHYRM	BZIP domain-containing protein. (511 aa)
	H3H441_PHYRM	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1045 aa)
	H3H779_PHYRM	Uncharacterized protein. (146 aa)
	H3H7B1_PHYRM	Uncharacterized protein. (151 aa)
	H3HDR3_PHYRM	Uncharacterized protein. (362 aa)
	H3HDS7_PHYRM	Non-specific serine/threonine protein kinase. (564 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G5C3_PHYRM	H3G5Z2_PHYRM	H3G5C3	H3G5Z2	Uncharacterized protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.668
H3G5C3_PHYRM	H3G783_PHYRM	H3G5C3	H3G783	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.616
H3G5D8_PHYRM	H3G5Z2_PHYRM	H3G5D8	H3G5Z2	Uncharacterized protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.668
H3G5D8_PHYRM	H3G783_PHYRM	H3G5D8	H3G783	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.616
H3G5Z2_PHYRM	H3G5C3_PHYRM	H3G5Z2	H3G5C3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.668
H3G5Z2_PHYRM	H3G5D8_PHYRM	H3G5Z2	H3G5D8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.668
H3G5Z2_PHYRM	H3G783_PHYRM	H3G5Z2	H3G783	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.980
H3G5Z2_PHYRM	H3GAN0_PHYRM	H3G5Z2	H3GAN0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.668
H3G5Z2_PHYRM	H3GGE2_PHYRM	H3G5Z2	H3GGE2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.576
H3G5Z2_PHYRM	H3GVI3_PHYRM	H3G5Z2	H3GVI3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.668
H3G5Z2_PHYRM	H3H7B1_PHYRM	H3G5Z2	H3H7B1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.576
H3G5Z2_PHYRM	H3HDS7_PHYRM	H3G5Z2	H3HDS7	WD_REPEATS_REGION domain-containing protein.	Non-specific serine/threonine protein kinase.	0.668
H3G783_PHYRM	H3G5C3_PHYRM	H3G783	H3G5C3	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.616
H3G783_PHYRM	H3G5D8_PHYRM	H3G783	H3G5D8	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.616
H3G783_PHYRM	H3G5Z2_PHYRM	H3G783	H3G5Z2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.980
H3G783_PHYRM	H3GAN0_PHYRM	H3G783	H3GAN0	Uncharacterized protein.	Uncharacterized protein.	0.616
H3G783_PHYRM	H3GF20_PHYRM	H3G783	H3GF20	Uncharacterized protein.	Uncharacterized protein.	0.503
H3G783_PHYRM	H3GGE2_PHYRM	H3G783	H3GGE2	Uncharacterized protein.	Uncharacterized protein.	0.605
H3G783_PHYRM	H3GVI3_PHYRM	H3G783	H3GVI3	Uncharacterized protein.	Uncharacterized protein.	0.616
H3G783_PHYRM	H3H7B1_PHYRM	H3G783	H3H7B1	Uncharacterized protein.	Uncharacterized protein.	0.605

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