(15 nodes) DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	H3G9D4_PHYRM	Uncharacterized protein. (669 aa)
	H3GEM0_PHYRM	Uncharacterized protein. (1436 aa)
	H3GQI3_PHYRM	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (529 aa)
	H3GYU6_PHYRM	Helicase ATP-binding domain-containing protein. (256 aa)
	H3H123_PHYRM	Uncharacterized protein. (784 aa)
	H3H3M8_PHYRM	Uncharacterized protein. (839 aa)
	H3G584_PHYRM	Uncharacterized protein. (437 aa)
	H3HDP3_PHYRM	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (840 aa)
	H3G5V7_PHYRM	Uncharacterized protein. (1181 aa)
	H3G7A2_PHYRM	Uncharacterized protein. (904 aa)
	H3G8C6_PHYRM	Helicase ATP-binding domain-containing protein. (781 aa)
	H3G922_PHYRM	Uncharacterized protein. (908 aa)
	H3G933_PHYRM	Uncharacterized protein. (698 aa)
	H3G987_PHYRM	Uncharacterized protein. (1184 aa)
	H3G560_PHYRM	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (418 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G560_PHYRM	H3G8C6_PHYRM	H3G560	H3G8C6	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Helicase ATP-binding domain-containing protein.	0.584
H3G560_PHYRM	H3GQI3_PHYRM	H3G560	H3GQI3	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.848
H3G560_PHYRM	H3GYU6_PHYRM	H3G560	H3GYU6	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Helicase ATP-binding domain-containing protein.	0.597
H3G560_PHYRM	H3HDP3_PHYRM	H3G560	H3HDP3	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.857
H3G584_PHYRM	H3G5V7_PHYRM	H3G584	H3G5V7	Uncharacterized protein.	Uncharacterized protein.	0.898
H3G584_PHYRM	H3G7A2_PHYRM	H3G584	H3G7A2	Uncharacterized protein.	Uncharacterized protein.	0.801
H3G584_PHYRM	H3G922_PHYRM	H3G584	H3G922	Uncharacterized protein.	Uncharacterized protein.	0.603
H3G584_PHYRM	H3G933_PHYRM	H3G584	H3G933	Uncharacterized protein.	Uncharacterized protein.	0.886
H3G584_PHYRM	H3G987_PHYRM	H3G584	H3G987	Uncharacterized protein.	Uncharacterized protein.	0.865
H3G584_PHYRM	H3G9D4_PHYRM	H3G584	H3G9D4	Uncharacterized protein.	Uncharacterized protein.	0.804
H3G5V7_PHYRM	H3G584_PHYRM	H3G5V7	H3G584	Uncharacterized protein.	Uncharacterized protein.	0.898
H3G5V7_PHYRM	H3G933_PHYRM	H3G5V7	H3G933	Uncharacterized protein.	Uncharacterized protein.	0.780
H3G5V7_PHYRM	H3G987_PHYRM	H3G5V7	H3G987	Uncharacterized protein.	Uncharacterized protein.	0.903
H3G5V7_PHYRM	H3G9D4_PHYRM	H3G5V7	H3G9D4	Uncharacterized protein.	Uncharacterized protein.	0.901
H3G5V7_PHYRM	H3GEM0_PHYRM	H3G5V7	H3GEM0	Uncharacterized protein.	Uncharacterized protein.	0.546
H3G5V7_PHYRM	H3H123_PHYRM	H3G5V7	H3H123	Uncharacterized protein.	Uncharacterized protein.	0.906
H3G5V7_PHYRM	H3H3M8_PHYRM	H3G5V7	H3H3M8	Uncharacterized protein.	Uncharacterized protein.	0.904
H3G7A2_PHYRM	H3G584_PHYRM	H3G7A2	H3G584	Uncharacterized protein.	Uncharacterized protein.	0.801
H3G7A2_PHYRM	H3G922_PHYRM	H3G7A2	H3G922	Uncharacterized protein.	Uncharacterized protein.	0.970
H3G7A2_PHYRM	H3G933_PHYRM	H3G7A2	H3G933	Uncharacterized protein.	Uncharacterized protein.	0.631

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