(89 nodes) Helicase superfamily 1/2, ATP-binding domain network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GLZ7_PHYRM	Uncharacterized protein. (1357 aa)
	H3GMA5_PHYRM	RNA helicase. (767 aa)
	H3GNQ4_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (564 aa)
	H3H3M8_PHYRM	Uncharacterized protein. (839 aa)
	H3H5C1_PHYRM	Uncharacterized protein. (2138 aa)
	H3H5C6_PHYRM	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (569 aa)
	H3H7Q1_PHYRM	Uncharacterized protein. (1045 aa)
	H3H7T6_PHYRM	Uncharacterized protein. (697 aa)
	H3HAQ3_PHYRM	RNA helicase. (1073 aa)
	H3HCY4_PHYRM	Uncharacterized protein. (1464 aa)
	H3HD47_PHYRM	Uncharacterized protein. (1239 aa)
	H3HDF9_PHYRM	Uncharacterized protein. (812 aa)
	H3HDI5_PHYRM	Uncharacterized protein. (327 aa)
	H3HDJ6_PHYRM	Helicase ATP-binding domain-containing protein. (520 aa)
	H3G9D4_PHYRM	Uncharacterized protein. (669 aa)
	H3G996_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (410 aa)
	H3G987_PHYRM	Uncharacterized protein. (1184 aa)
	H3G933_PHYRM	Uncharacterized protein. (698 aa)
	H3G926_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (394 aa)
	H3G922_PHYRM	Uncharacterized protein. (908 aa)
	H3G8T0_PHYRM	Uncharacterized protein. (757 aa)
	H3G7N9_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (763 aa)
	H3G7F5_PHYRM	Uncharacterized protein. (767 aa)
	H3G7A2_PHYRM	Uncharacterized protein. (904 aa)
	H3G791_PHYRM	Uncharacterized protein. (436 aa)
	H3GQ59_PHYRM	Uncharacterized protein. (712 aa)
	H3GQ72_PHYRM	Uncharacterized protein. (768 aa)
	H3GQI3_PHYRM	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (529 aa)
	H3GQW1_PHYRM	Uncharacterized protein. (385 aa)
	H3GRN1_PHYRM	Uncharacterized protein. (673 aa)
	H3GRQ0_PHYRM	Uncharacterized protein. (776 aa)
	H3GSH8_PHYRM	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (833 aa)
	H3GRS2_PHYRM	Uncharacterized protein. (1068 aa)
	H3GSL8_PHYRM	Uncharacterized protein. (1128 aa)
	H3GT70_PHYRM	Uncharacterized protein. (1212 aa)
	H3GTC5_PHYRM	Uncharacterized protein. (3449 aa)
	H3GTE0_PHYRM	Uncharacterized protein. (1896 aa)
	H3GTT0_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (504 aa)
	H3GTT5_PHYRM	Helicase ATP-binding domain-containing protein. (291 aa)
	H3GUQ8_PHYRM	Uncharacterized protein. (2572 aa)
	H3GV41_PHYRM	Uncharacterized protein. (1110 aa)
	H3GVG1_PHYRM	Uncharacterized protein. (855 aa)
	H3GW83_PHYRM	Uncharacterized protein. (966 aa)
	H3GWG5_PHYRM	Uncharacterized protein. (838 aa)
	H3GX83_PHYRM	Uncharacterized protein. (1864 aa)
	H3GYF6_PHYRM	Uncharacterized protein. (466 aa)
	H3GZ46_PHYRM	Helicase ATP-binding domain-containing protein. (2891 aa)
	H3H038_PHYRM	AN1-type domain-containing protein. (1108 aa)
	H3H123_PHYRM	Uncharacterized protein. (784 aa)
	H3H1H3_PHYRM	Uncharacterized protein. (864 aa)
	H3HDP3_PHYRM	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (840 aa)
	H3G4Y9_PHYRM	Uncharacterized protein. (569 aa)
	H3G560_PHYRM	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (418 aa)
	H3G584_PHYRM	Uncharacterized protein. (437 aa)
	H3G5E4_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (580 aa)
	H3G5M5_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (479 aa)
	H3G5S8_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (419 aa)
	H3G5V7_PHYRM	Uncharacterized protein. (1181 aa)
	H3G608_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (561 aa)
	H3G649_PHYRM	RNA helicase. (457 aa)
	H3G669_PHYRM	Uncharacterized protein. (446 aa)
	H3G6A8_PHYRM	Uncharacterized protein. (653 aa)
	H3G6G9_PHYRM	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (582 aa)
	H3G6J2_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (576 aa)
	H3G6N5_PHYRM	Uncharacterized protein. (535 aa)
	H3G6V1_PHYRM	Uncharacterized protein. (2122 aa)
	H3GEP5_PHYRM	Uncharacterized protein. (1066 aa)
	H3GEM0_PHYRM	Uncharacterized protein. (1436 aa)
	H3GDU3_PHYRM	Uncharacterized protein. (1909 aa)
	H3GBF2_PHYRM	Helicase C-terminal domain-containing protein. (883 aa)
	H3GBC9_PHYRM	Uncharacterized protein. (686 aa)
	H3GAU9_PHYRM	Uncharacterized protein. (793 aa)
	H3GAA2_PHYRM	Uncharacterized protein. (684 aa)
	H3GA17_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (406 aa)
	H3G9Z6_PHYRM	Uncharacterized protein. (428 aa)
	H3G9I9_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (504 aa)
	H3G6X2_PHYRM	Uncharacterized protein. (864 aa)
	H3G746_PHYRM	Uncharacterized protein. (626 aa)
	H3G780_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (458 aa)
	H3GEV6_PHYRM	Uncharacterized protein. (1275 aa)
	H3GFK4_PHYRM	Uncharacterized protein. (1518 aa)
	H3GTJ9_PHYRM	Uncharacterized protein. (1398 aa)
	H3GG09_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (793 aa)
	H3GGI0_PHYRM	Uncharacterized protein. (909 aa)
	H3GH04_PHYRM	Uncharacterized protein. (619 aa)
	H3GHW5_PHYRM	Helicase ATP-binding domain-containing protein. (1002 aa)
	H3GJ31_PHYRM	Uncharacterized protein. (2159 aa)
	H3GJ91_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (590 aa)
	H3GKT6_PHYRM	Uncharacterized protein. (480 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G4Y9_PHYRM	H3G560_PHYRM	H3G4Y9	H3G560	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.743
H3G4Y9_PHYRM	H3G6N5_PHYRM	H3G4Y9	H3G6N5	Uncharacterized protein.	Uncharacterized protein.	0.832
H3G4Y9_PHYRM	H3G746_PHYRM	H3G4Y9	H3G746	Uncharacterized protein.	Uncharacterized protein.	0.412
H3G4Y9_PHYRM	H3GAU9_PHYRM	H3G4Y9	H3GAU9	Uncharacterized protein.	Uncharacterized protein.	0.637
H3G4Y9_PHYRM	H3GDU3_PHYRM	H3G4Y9	H3GDU3	Uncharacterized protein.	Uncharacterized protein.	0.667
H3G4Y9_PHYRM	H3GHW5_PHYRM	H3G4Y9	H3GHW5	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.518
H3G4Y9_PHYRM	H3GMA5_PHYRM	H3G4Y9	H3GMA5	Uncharacterized protein.	RNA helicase.	0.408
H3G4Y9_PHYRM	H3GQ59_PHYRM	H3G4Y9	H3GQ59	Uncharacterized protein.	Uncharacterized protein.	0.694
H3G4Y9_PHYRM	H3GQI3_PHYRM	H3G4Y9	H3GQI3	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.743
H3G4Y9_PHYRM	H3GRS2_PHYRM	H3G4Y9	H3GRS2	Uncharacterized protein.	Uncharacterized protein.	0.757
H3G4Y9_PHYRM	H3GV41_PHYRM	H3G4Y9	H3GV41	Uncharacterized protein.	Uncharacterized protein.	0.743
H3G4Y9_PHYRM	H3GW83_PHYRM	H3G4Y9	H3GW83	Uncharacterized protein.	Uncharacterized protein.	0.466
H3G4Y9_PHYRM	H3H5C6_PHYRM	H3G4Y9	H3H5C6	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.743
H3G4Y9_PHYRM	H3HDP3_PHYRM	H3G4Y9	H3HDP3	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.743
H3G560_PHYRM	H3G4Y9_PHYRM	H3G560	H3G4Y9	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Uncharacterized protein.	0.743
H3G560_PHYRM	H3G608_PHYRM	H3G560	H3G608	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.407
H3G560_PHYRM	H3G6G9_PHYRM	H3G560	H3G6G9	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.532
H3G560_PHYRM	H3G6N5_PHYRM	H3G560	H3G6N5	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Uncharacterized protein.	0.998
H3G560_PHYRM	H3GHW5_PHYRM	H3G560	H3GHW5	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Helicase ATP-binding domain-containing protein.	0.597
H3G560_PHYRM	H3GQ59_PHYRM	H3G560	H3GQ59	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Uncharacterized protein.	0.465

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