STRINGSTRING
H3G9U1_PHYRM H3G9U1_PHYRM H3GNQ5_PHYRM H3GNQ5_PHYRM H3GAE0_PHYRM H3GAE0_PHYRM H3GAA6_PHYRM H3GAA6_PHYRM H3GA71_PHYRM H3GA71_PHYRM H3G9W2_PHYRM H3G9W2_PHYRM H3G9F4_PHYRM H3G9F4_PHYRM H3G8R9_PHYRM H3G8R9_PHYRM H3G5N0_PHYRM H3G5N0_PHYRM H3GSW8_PHYRM H3GSW8_PHYRM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3G9U1_PHYRMRibosomal_L7Ae domain-containing protein. (112 aa)
H3GNQ5_PHYRMRibosomal_L7Ae domain-containing protein; Belongs to the IPP transferase family. (585 aa)
H3GAE0_PHYRM40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (138 aa)
H3GAA6_PHYRMRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (148 aa)
H3GA71_PHYRMRibosomal_L7Ae domain-containing protein. (112 aa)
H3G9W2_PHYRMRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
H3G9F4_PHYRMeRF1_1 domain-containing protein. (439 aa)
H3G8R9_PHYRMProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (406 aa)
H3G5N0_PHYRMRibosomal_L7Ae domain-containing protein. (232 aa)
H3GSW8_PHYRMSpoU_sub_bind domain-containing protein. (344 aa)
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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