(113 nodes) Cytokine Signaling in Immune system network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3HCW9_PHYRM	Uncharacterized protein. (663 aa)
	H3GV37_PHYRM	GB1/RHD3-type G domain-containing protein. (640 aa)
	H3GVI3_PHYRM	Uncharacterized protein. (520 aa)
	H3GW57_PHYRM	Uncharacterized protein. (469 aa)
	H3GWE0_PHYRM	Uncharacterized protein. (516 aa)
	H3GWU8_PHYRM	Uncharacterized protein. (327 aa)
	H3GXG5_PHYRM	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (226 aa)
	H3GXS0_PHYRM	Uncharacterized protein. (662 aa)
	H3GXS4_PHYRM	Uncharacterized protein. (662 aa)
	H3GXU8_PHYRM	Uncharacterized protein. (243 aa)
	H3GYE2_PHYRM	Uncharacterized protein. (737 aa)
	H3GYM2_PHYRM	Uncharacterized protein. (846 aa)
	H3GYW0_PHYRM	Uncharacterized protein. (151 aa)
	H3GYW7_PHYRM	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (232 aa)
	H3GZB5_PHYRM	Uncharacterized protein. (292 aa)
	H3GZN4_PHYRM	DUF4203 domain-containing protein. (567 aa)
	H3H0W8_PHYRM	GBP domain-containing protein. (839 aa)
	H3H0Z3_PHYRM	ADF-H domain-containing protein. (1838 aa)
	H3H3X0_PHYRM	PH domain-containing protein. (714 aa)
	H3H3X2_PHYRM	MFS domain-containing protein. (528 aa)
	H3H423_PHYRM	DUF3437 domain-containing protein. (196 aa)
	H3H450_PHYRM	Uncharacterized protein. (567 aa)
	H3H6T6_PHYRM	Uncharacterized protein. (237 aa)
	H3HAD6_PHYRM	Uncharacterized protein. (268 aa)
	H3HAU9_PHYRM	Uncharacterized protein. (503 aa)
	H3HAY8_PHYRM	PDZ domain-containing protein. (1112 aa)
	H3HBF1_PHYRM	Uncharacterized protein. (267 aa)
	H3HBQ6_PHYRM	Uncharacterized protein. (445 aa)
	H3HBW5_PHYRM	Uncharacterized protein. (588 aa)
	H3HC94_PHYRM	Uncharacterized protein. (337 aa)
	H3HDI9_PHYRM	Uncharacterized protein. (894 aa)
	H3HDQ6_PHYRM	Uncharacterized protein. (552 aa)
	H3HDS7_PHYRM	Non-specific serine/threonine protein kinase. (564 aa)
	H3HEB6_PHYRM	CHAT domain-containing protein. (627 aa)
	H3HEF1_PHYRM	Uncharacterized protein. (887 aa)
	H3GV10_PHYRM	BZIP domain-containing protein. (465 aa)
	H3GUX0_PHYRM	Uncharacterized protein. (604 aa)
	H3GUU8_PHYRM	Uncharacterized protein. (116 aa)
	H3GUD7_PHYRM	Uncharacterized protein. (274 aa)
	H3GUB4_PHYRM	Uncharacterized protein. (686 aa)
	H3GSM8_PHYRM	Tyrosine-protein phosphatase domain-containing protein. (281 aa)
	H3GS60_PHYRM	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (165 aa)
	H3GS57_PHYRM	PI31_Prot_N domain-containing protein. (347 aa)
	H3GRM5_PHYRM	Uncharacterized protein. (408 aa)
	H3GQY1_PHYRM	LysM domain-containing protein. (186 aa)
	H3GP38_PHYRM	Uncharacterized protein. (659 aa)
	H3GNV7_PHYRM	Uncharacterized protein. (174 aa)
	H3GNU4_PHYRM	BZIP domain-containing protein. (484 aa)
	H3GNU1_PHYRM	Uncharacterized protein. (292 aa)
	H3GNC0_PHYRM	Uncharacterized protein. (540 aa)
	H3GMX8_PHYRM	GBP domain-containing protein. (1055 aa)
	H3GM77_PHYRM	Uncharacterized protein. (234 aa)
	H3GM50_PHYRM	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (217 aa)
	H3GLX1_PHYRM	ANK_REP_REGION domain-containing protein. (1145 aa)
	H3GLE4_PHYRM	Uncharacterized protein. (614 aa)
	H3GLE3_PHYRM	Uncharacterized protein. (322 aa)
	H3GLE2_PHYRM	Uncharacterized protein. (642 aa)
	H3GLE1_PHYRM	Uncharacterized protein. (691 aa)
	H3GLE0_PHYRM	Uncharacterized protein. (617 aa)
	H3GLB3_PHYRM	Uncharacterized protein. (431 aa)
	H3GLA1_PHYRM	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1267 aa)
	H3GL97_PHYRM	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1373 aa)
	H3GKT3_PHYRM	GB1/RHD3-type G domain-containing protein. (795 aa)
	H3GJT1_PHYRM	Metallophos domain-containing protein. (261 aa)
	H3GJQ8_PHYRM	Uncharacterized protein. (1022 aa)
	H3GJ95_PHYRM	Uncharacterized protein. (730 aa)
	H3GIN7_PHYRM	Uncharacterized protein. (1295 aa)
	H3GIF9_PHYRM	Uncharacterized protein. (460 aa)
	H3GID7_PHYRM	Uncharacterized protein. (565 aa)
	H3GID6_PHYRM	Uncharacterized protein. (172 aa)
	H3GH27_PHYRM	BZIP domain-containing protein. (803 aa)
	H3GGW4_PHYRM	Uncharacterized protein. (541 aa)
	H3GGW3_PHYRM	Uncharacterized protein. (467 aa)
	H3GFK2_PHYRM	Uncharacterized protein. (1497 aa)
	H3GES9_PHYRM	GB1/RHD3-type G domain-containing protein. (735 aa)
	H3GES3_PHYRM	Uncharacterized protein. (436 aa)
	H3GEF7_PHYRM	Uncharacterized protein. (490 aa)
	H3GDZ1_PHYRM	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (353 aa)
	H3GDY2_PHYRM	Uncharacterized protein. (255 aa)
	H3GD06_PHYRM	Uncharacterized protein. (577 aa)
	H3GCU2_PHYRM	Uncharacterized protein. (420 aa)
	H3GCN3_PHYRM	GBP domain-containing protein. (280 aa)
	H3GCM9_PHYRM	Importin N-terminal domain-containing protein. (858 aa)
	H3GCK5_PHYRM	HATPase_c domain-containing protein. (849 aa)
	H3GCJ0_PHYRM	Uncharacterized protein. (533 aa)
	H3GBZ7_PHYRM	Proteasome subunit alpha type. (249 aa)
	H3GBX3_PHYRM	Uncharacterized protein. (199 aa)
	H3GBX1_PHYRM	Uncharacterized protein. (199 aa)
	H3GBB7_PHYRM	MFS domain-containing protein. (534 aa)
	H3GAR9_PHYRM	Uncharacterized protein. (581 aa)
	H3GAN0_PHYRM	Uncharacterized protein. (211 aa)
	H3GA47_PHYRM	RING-type domain-containing protein. (111 aa)
	H3GA17_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (406 aa)
	H3G9X4_PHYRM	PCI domain-containing protein. (404 aa)
	H3G9R0_PHYRM	Uncharacterized protein. (381 aa)
	H3G926_PHYRM	Uncharacterized protein; Belongs to the DEAD box helicase family. (394 aa)
	H3G904_PHYRM	Serine/threonine-protein phosphatase. (319 aa)
	H3G8T9_PHYRM	Ubiquitin-like domain-containing protein. (164 aa)
	H3G8L9_PHYRM	Serine/threonine-protein phosphatase. (312 aa)
	H3G8I4_PHYRM	Proteasome subunit alpha type. (236 aa)
	H3G8I0_PHYRM	Uncharacterized protein. (230 aa)
	H3G8A4_PHYRM	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (218 aa)
	H3G7J9_PHYRM	Uncharacterized protein. (626 aa)
	H3G682_PHYRM	Ubiquitin-like domain-containing protein. (67 aa)
	H3G5U5_PHYRM	RPN2_C domain-containing protein; Belongs to the proteasome subunit S1 family. (981 aa)
	H3G5S7_PHYRM	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (234 aa)
	H3G5H7_PHYRM	Uncharacterized protein. (107 aa)
	H3G5D8_PHYRM	Uncharacterized protein; Belongs to the protein kinase superfamily. (299 aa)
	H3G5C3_PHYRM	Uncharacterized protein; Belongs to the protein kinase superfamily. (300 aa)
	H3G587_PHYRM	Uncharacterized protein; Belongs to the BolA/IbaG family. (60 aa)
	H3G543_PHYRM	Ubiquitin-like domain-containing protein. (54 aa)
	H3G4X9_PHYRM	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (257 aa)
	CES4	Cellulose synthase 4. (1019 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CES4	H3G926_PHYRM	A5A604	H3G926	Cellulose synthase 4.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.906
CES4	H3GA17_PHYRM	A5A604	H3GA17	Cellulose synthase 4.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.774
CES4	H3GYW7_PHYRM	A5A604	H3GYW7	Cellulose synthase 4.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.576
H3G4X9_PHYRM	H3G5C3_PHYRM	H3G4X9	H3G5C3	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.659
H3G4X9_PHYRM	H3G5D8_PHYRM	H3G4X9	H3G5D8	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.659
H3G4X9_PHYRM	H3GAN0_PHYRM	H3G4X9	H3GAN0	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.659
H3G4X9_PHYRM	H3GBX1_PHYRM	H3G4X9	H3GBX1	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.740
H3G4X9_PHYRM	H3GDZ1_PHYRM	H3G4X9	H3GDZ1	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.430
H3G4X9_PHYRM	H3GL97_PHYRM	H3G4X9	H3GL97	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.954
H3G4X9_PHYRM	H3GLA1_PHYRM	H3G4X9	H3GLA1	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.954
H3G4X9_PHYRM	H3GSM8_PHYRM	H3G4X9	H3GSM8	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Tyrosine-protein phosphatase domain-containing protein.	0.430
H3G4X9_PHYRM	H3GVI3_PHYRM	H3G4X9	H3GVI3	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.659
H3G4X9_PHYRM	H3HC94_PHYRM	H3G4X9	H3HC94	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.430
H3G4X9_PHYRM	H3HDS7_PHYRM	H3G4X9	H3HDS7	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Non-specific serine/threonine protein kinase.	0.659
H3G543_PHYRM	H3G5S7_PHYRM	H3G543	H3G5S7	Ubiquitin-like domain-containing protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.810
H3G543_PHYRM	H3G5U5_PHYRM	H3G543	H3G5U5	Ubiquitin-like domain-containing protein.	RPN2_C domain-containing protein; Belongs to the proteasome subunit S1 family.	0.773
H3G543_PHYRM	H3G7J9_PHYRM	H3G543	H3G7J9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.606
H3G543_PHYRM	H3G8A4_PHYRM	H3G543	H3G8A4	Ubiquitin-like domain-containing protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.841
H3G543_PHYRM	H3G8I4_PHYRM	H3G543	H3G8I4	Ubiquitin-like domain-containing protein.	Proteasome subunit alpha type.	0.828
H3G543_PHYRM	H3G8L9_PHYRM	H3G543	H3G8L9	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.521

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