(44 nodes) Toll Like Receptor 3 (TLR3) Cascade network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GJT1_PHYRM	Metallophos domain-containing protein. (261 aa)
	H3GZN4_PHYRM	DUF4203 domain-containing protein. (567 aa)
	H3HAY8_PHYRM	PDZ domain-containing protein. (1112 aa)
	H3HBF1_PHYRM	Uncharacterized protein. (267 aa)
	H3HBQ6_PHYRM	Uncharacterized protein. (445 aa)
	H3HBW5_PHYRM	Uncharacterized protein. (588 aa)
	H3HC94_PHYRM	Uncharacterized protein. (337 aa)
	H3HCW9_PHYRM	Uncharacterized protein. (663 aa)
	H3GNV7_PHYRM	Uncharacterized protein. (174 aa)
	H3GNC0_PHYRM	Uncharacterized protein. (540 aa)
	H3GM77_PHYRM	Uncharacterized protein. (234 aa)
	H3GLX1_PHYRM	ANK_REP_REGION domain-containing protein. (1145 aa)
	H3GLB3_PHYRM	Uncharacterized protein. (431 aa)
	H3GJQ8_PHYRM	Uncharacterized protein. (1022 aa)
	H3GJ95_PHYRM	Uncharacterized protein. (730 aa)
	H3GIN7_PHYRM	Uncharacterized protein. (1295 aa)
	H3GIF9_PHYRM	Uncharacterized protein. (460 aa)
	H3GID7_PHYRM	Uncharacterized protein. (565 aa)
	H3GID6_PHYRM	Uncharacterized protein. (172 aa)
	H3GH27_PHYRM	BZIP domain-containing protein. (803 aa)
	H3GGW4_PHYRM	Uncharacterized protein. (541 aa)
	H3GGW3_PHYRM	Uncharacterized protein. (467 aa)
	H3GFK2_PHYRM	Uncharacterized protein. (1497 aa)
	H3GES3_PHYRM	Uncharacterized protein. (436 aa)
	H3GEF7_PHYRM	Uncharacterized protein. (490 aa)
	H3GDZ1_PHYRM	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (353 aa)
	H3GDY2_PHYRM	Uncharacterized protein. (255 aa)
	H3GD06_PHYRM	Uncharacterized protein. (577 aa)
	H3GCU2_PHYRM	Uncharacterized protein. (420 aa)
	H3GBX3_PHYRM	Uncharacterized protein. (199 aa)
	H3GAR9_PHYRM	Uncharacterized protein. (581 aa)
	H3G904_PHYRM	Serine/threonine-protein phosphatase. (319 aa)
	H3G8T9_PHYRM	Ubiquitin-like domain-containing protein. (164 aa)
	H3G8L9_PHYRM	Serine/threonine-protein phosphatase. (312 aa)
	H3GSM8_PHYRM	Tyrosine-protein phosphatase domain-containing protein. (281 aa)
	H3GRM5_PHYRM	Uncharacterized protein. (408 aa)
	H3GUB4_PHYRM	Uncharacterized protein. (686 aa)
	H3GUD7_PHYRM	Uncharacterized protein. (274 aa)
	H3GV10_PHYRM	BZIP domain-containing protein. (465 aa)
	H3GW57_PHYRM	Uncharacterized protein. (469 aa)
	H3GWU8_PHYRM	Uncharacterized protein. (327 aa)
	H3GYE2_PHYRM	Uncharacterized protein. (737 aa)
	H3GYW0_PHYRM	Uncharacterized protein. (151 aa)
	H3GZB5_PHYRM	Uncharacterized protein. (292 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G8L9_PHYRM	H3G8T9_PHYRM	H3G8L9	H3G8T9	Serine/threonine-protein phosphatase.	Ubiquitin-like domain-containing protein.	0.589
H3G8L9_PHYRM	H3G904_PHYRM	H3G8L9	H3G904	Serine/threonine-protein phosphatase.	Serine/threonine-protein phosphatase.	0.901
H3G8L9_PHYRM	H3GAR9_PHYRM	H3G8L9	H3GAR9	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.971
H3G8L9_PHYRM	H3GD06_PHYRM	H3G8L9	H3GD06	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.971
H3G8L9_PHYRM	H3GH27_PHYRM	H3G8L9	H3GH27	Serine/threonine-protein phosphatase.	BZIP domain-containing protein.	0.489
H3G8L9_PHYRM	H3GV10_PHYRM	H3G8L9	H3GV10	Serine/threonine-protein phosphatase.	BZIP domain-containing protein.	0.489
H3G8L9_PHYRM	H3GYE2_PHYRM	H3G8L9	H3GYE2	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.861
H3G8L9_PHYRM	H3HAY8_PHYRM	H3G8L9	H3HAY8	Serine/threonine-protein phosphatase.	PDZ domain-containing protein.	0.861
H3G8T9_PHYRM	H3G8L9_PHYRM	H3G8T9	H3G8L9	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.589
H3G8T9_PHYRM	H3G904_PHYRM	H3G8T9	H3G904	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.589
H3G8T9_PHYRM	H3GAR9_PHYRM	H3G8T9	H3GAR9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.540
H3G8T9_PHYRM	H3GCU2_PHYRM	H3G8T9	H3GCU2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.587
H3G8T9_PHYRM	H3GD06_PHYRM	H3G8T9	H3GD06	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.540
H3G8T9_PHYRM	H3GDY2_PHYRM	H3G8T9	H3GDY2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.587
H3G8T9_PHYRM	H3GEF7_PHYRM	H3G8T9	H3GEF7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.587
H3G8T9_PHYRM	H3GES3_PHYRM	H3G8T9	H3GES3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.587
H3G8T9_PHYRM	H3GFK2_PHYRM	H3G8T9	H3GFK2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.587
H3G8T9_PHYRM	H3GGW3_PHYRM	H3G8T9	H3GGW3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.587
H3G8T9_PHYRM	H3GGW4_PHYRM	H3G8T9	H3GGW4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.587
H3G8T9_PHYRM	H3GIN7_PHYRM	H3G8T9	H3GIN7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.587

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