(23 nodes) Vitamin B2 (riboflavin) metabolism network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3H8H7_PHYRM	Uncharacterized protein. (244 aa)
	H3GAA3_PHYRM	Flavokinase domain-containing protein. (139 aa)
	H3GBP3_PHYRM	Metallophos domain-containing protein. (507 aa)
	H3GHS6_PHYRM	Metallophos domain-containing protein. (484 aa)
	H3GK68_PHYRM	Metallophos domain-containing protein. (484 aa)
	H3GK69_PHYRM	Metallophos domain-containing protein. (491 aa)
	H3GK70_PHYRM	Metallophos domain-containing protein. (484 aa)
	H3GK71_PHYRM	Uncharacterized protein. (487 aa)
	H3GK72_PHYRM	Uncharacterized protein. (484 aa)
	H3GK73_PHYRM	Uncharacterized protein. (486 aa)
	H3GK87_PHYRM	Metallophos domain-containing protein. (485 aa)
	H3GL70_PHYRM	Metallophos domain-containing protein. (393 aa)
	H3GLK2_PHYRM	MoCF_biosynth domain-containing protein. (269 aa)
	H3GLK4_PHYRM	MoCF_biosynth domain-containing protein. (265 aa)
	H3GM91_PHYRM	Uncharacterized protein. (291 aa)
	H3GWN6_PHYRM	Metallophos domain-containing protein. (426 aa)
	H3GWN8_PHYRM	Uncharacterized protein. (252 aa)
	H3GWP0_PHYRM	Metallophos domain-containing protein. (417 aa)
	H3GYK7_PHYRM	Uncharacterized protein. (341 aa)
	H3GZY5_PHYRM	Metallophos domain-containing protein. (294 aa)
	H3GZY6_PHYRM	Metallophos domain-containing protein. (425 aa)
	H3H5D5_PHYRM	Uncharacterized protein. (341 aa)
	H3H8D4_PHYRM	Metallophos domain-containing protein. (352 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3GAA3_PHYRM	H3GBP3_PHYRM	H3GAA3	H3GBP3	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3GHS6_PHYRM	H3GAA3	H3GHS6	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3GK68_PHYRM	H3GAA3	H3GK68	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3GK69_PHYRM	H3GAA3	H3GK69	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3GK70_PHYRM	H3GAA3	H3GK70	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3GK71_PHYRM	H3GAA3	H3GK71	Flavokinase domain-containing protein.	Uncharacterized protein.	0.761
H3GAA3_PHYRM	H3GK72_PHYRM	H3GAA3	H3GK72	Flavokinase domain-containing protein.	Uncharacterized protein.	0.761
H3GAA3_PHYRM	H3GK73_PHYRM	H3GAA3	H3GK73	Flavokinase domain-containing protein.	Uncharacterized protein.	0.761
H3GAA3_PHYRM	H3GK87_PHYRM	H3GAA3	H3GK87	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3GL70_PHYRM	H3GAA3	H3GL70	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.860
H3GAA3_PHYRM	H3GLK2_PHYRM	H3GAA3	H3GLK2	Flavokinase domain-containing protein.	MoCF_biosynth domain-containing protein.	0.903
H3GAA3_PHYRM	H3GLK4_PHYRM	H3GAA3	H3GLK4	Flavokinase domain-containing protein.	MoCF_biosynth domain-containing protein.	0.903
H3GAA3_PHYRM	H3GM91_PHYRM	H3GAA3	H3GM91	Flavokinase domain-containing protein.	Uncharacterized protein.	0.942
H3GAA3_PHYRM	H3GWN6_PHYRM	H3GAA3	H3GWN6	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3GWN8_PHYRM	H3GAA3	H3GWN8	Flavokinase domain-containing protein.	Uncharacterized protein.	0.761
H3GAA3_PHYRM	H3GWP0_PHYRM	H3GAA3	H3GWP0	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3GZY5_PHYRM	H3GAA3	H3GZY5	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3GZY6_PHYRM	H3GAA3	H3GZY6	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GAA3_PHYRM	H3H8D4_PHYRM	H3GAA3	H3H8D4	Flavokinase domain-containing protein.	Metallophos domain-containing protein.	0.761
H3GBP3_PHYRM	H3GAA3_PHYRM	H3GBP3	H3GAA3	Metallophos domain-containing protein.	Flavokinase domain-containing protein.	0.761

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