(27 nodes) TP53 Regulates Metabolic Genes network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3GA84_PHYRM	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (493 aa)
	H3GA09_PHYRM	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (485 aa)
	H3G8D0_PHYRM	Glucose-6-phosphate isomerase; Belongs to the GPI family. (557 aa)
	H3G7X6_PHYRM	Uncharacterized protein. (192 aa)
	H3G783_PHYRM	Uncharacterized protein. (321 aa)
	H3G751_PHYRM	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (489 aa)
	H3G6K1_PHYRM	Uncharacterized protein. (69 aa)
	H3G5Z2_PHYRM	WD_REPEATS_REGION domain-containing protein. (1226 aa)
	H3G5D8_PHYRM	Uncharacterized protein; Belongs to the protein kinase superfamily. (299 aa)
	H3G5C3_PHYRM	Uncharacterized protein; Belongs to the protein kinase superfamily. (300 aa)
	H3G581_PHYRM	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (102 aa)
	H3HCM4_PHYRM	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family. (108 aa)
	H3H7R5_PHYRM	Uncharacterized protein. (379 aa)
	H3H7B1_PHYRM	Uncharacterized protein. (151 aa)
	H3HEB7_PHYRM	Uncharacterized protein. (133 aa)
	H3H4Q6_PHYRM	Uncharacterized protein. (278 aa)
	H3H1L1_PHYRM	Thioredoxin domain-containing protein. (105 aa)
	H3GVI3_PHYRM	Uncharacterized protein. (520 aa)
	H3GSB2_PHYRM	PUL domain-containing protein. (457 aa)
	H3GH92_PHYRM	Rap-GAP domain-containing protein. (148 aa)
	H3HDS7_PHYRM	Non-specific serine/threonine protein kinase. (564 aa)
	H3GH91_PHYRM	Uncharacterized protein. (404 aa)
	H3GH48_PHYRM	Uncharacterized protein. (245 aa)
	H3GGE2_PHYRM	Uncharacterized protein. (572 aa)
	H3GAR2_PHYRM	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (249 aa)
	H3GAN0_PHYRM	Uncharacterized protein. (211 aa)
	H3GAF7_PHYRM	WD_REPEATS_REGION domain-containing protein. (293 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G581_PHYRM	H3G6K1_PHYRM	H3G581	H3G6K1	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.946
H3G581_PHYRM	H3G7X6_PHYRM	H3G581	H3G7X6	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.737
H3G581_PHYRM	H3GA09_PHYRM	H3G581	H3GA09	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.487
H3G581_PHYRM	H3GA84_PHYRM	H3G581	H3GA84	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.487
H3G581_PHYRM	H3GH48_PHYRM	H3G581	H3GH48	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.761
H3G581_PHYRM	H3H1L1_PHYRM	H3G581	H3H1L1	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Thioredoxin domain-containing protein.	0.429
H3G581_PHYRM	H3HCM4_PHYRM	H3G581	H3HCM4	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	0.959
H3G581_PHYRM	H3HEB7_PHYRM	H3G581	H3HEB7	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.977
H3G5C3_PHYRM	H3G5Z2_PHYRM	H3G5C3	H3G5Z2	Uncharacterized protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.668
H3G5C3_PHYRM	H3G783_PHYRM	H3G5C3	H3G783	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.616
H3G5C3_PHYRM	H3GAF7_PHYRM	H3G5C3	H3GAF7	Uncharacterized protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.596
H3G5C3_PHYRM	H3GAR2_PHYRM	H3G5C3	H3GAR2	Uncharacterized protein; Belongs to the protein kinase superfamily.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.617
H3G5C3_PHYRM	H3GH91_PHYRM	H3G5C3	H3GH91	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.643
H3G5C3_PHYRM	H3GH92_PHYRM	H3G5C3	H3GH92	Uncharacterized protein; Belongs to the protein kinase superfamily.	Rap-GAP domain-containing protein.	0.643
H3G5D8_PHYRM	H3G5Z2_PHYRM	H3G5D8	H3G5Z2	Uncharacterized protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.668
H3G5D8_PHYRM	H3G783_PHYRM	H3G5D8	H3G783	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.616
H3G5D8_PHYRM	H3GAF7_PHYRM	H3G5D8	H3GAF7	Uncharacterized protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.596
H3G5D8_PHYRM	H3GAR2_PHYRM	H3G5D8	H3GAR2	Uncharacterized protein; Belongs to the protein kinase superfamily.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.617
H3G5D8_PHYRM	H3GH91_PHYRM	H3G5D8	H3GH91	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.643
H3G5D8_PHYRM	H3GH92_PHYRM	H3G5D8	H3GH92	Uncharacterized protein; Belongs to the protein kinase superfamily.	Rap-GAP domain-containing protein.	0.643

page 1 of 9

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About