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H3G577_PHYRM H3G577_PHYRM H3G578_PHYRM H3G578_PHYRM H3G5C8_PHYRM H3G5C8_PHYRM H3HE74_PHYRM H3HE74_PHYRM H3HD44_PHYRM H3HD44_PHYRM H3HC03_PHYRM H3HC03_PHYRM H3H6J9_PHYRM H3H6J9_PHYRM H3G5M2_PHYRM H3G5M2_PHYRM H3G7C4_PHYRM H3G7C4_PHYRM H3G8B8_PHYRM H3G8B8_PHYRM H3G8T3_PHYRM H3G8T3_PHYRM NTH1 NTH1 H3G9U4_PHYRM H3G9U4_PHYRM H3GAJ2_PHYRM H3GAJ2_PHYRM FEN1 FEN1 H3GCB9_PHYRM H3GCB9_PHYRM NTH1-2 NTH1-2 H3GGD4_PHYRM H3GGD4_PHYRM H3GH16_PHYRM H3GH16_PHYRM H3GL42_PHYRM H3GL42_PHYRM H3GMS2_PHYRM H3GMS2_PHYRM H3GVG8_PHYRM H3GVG8_PHYRM H3GWA8_PHYRM H3GWA8_PHYRM H3H0W6_PHYRM H3H0W6_PHYRM H3H4R1_PHYRM H3H4R1_PHYRM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3G577_PHYRMPoly [ADP-ribose] polymerase. (277 aa)
H3G578_PHYRMPoly [ADP-ribose] polymerase. (71 aa)
H3G5C8_PHYRMDNA ligase. (627 aa)
H3HE74_PHYRMUncharacterized protein. (550 aa)
H3HD44_PHYRMPoly [ADP-ribose] polymerase. (1755 aa)
H3HC03_PHYRMUncharacterized protein. (158 aa)
H3H6J9_PHYRMDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (689 aa)
H3G5M2_PHYRMAAA domain-containing protein. (332 aa)
H3G7C4_PHYRMDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2185 aa)
H3G8B8_PHYRMAAA domain-containing protein. (327 aa)
H3G8T3_PHYRMAAA domain-containing protein. (353 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (246 aa)
H3G9U4_PHYRMProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
H3GAJ2_PHYRMUncharacterized protein. (352 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (392 aa)
H3GCB9_PHYRMReplication protein A subunit. (622 aa)
NTH1-2Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (308 aa)
H3GGD4_PHYRMUncharacterized protein. (1368 aa)
H3GH16_PHYRMUncharacterized protein. (658 aa)
H3GL42_PHYRMUncharacterized protein. (146 aa)
H3GMS2_PHYRMUncharacterized protein. (1034 aa)
H3GVG8_PHYRMAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (590 aa)
H3GWA8_PHYRMReplication factor C subunit 1. (850 aa)
H3H0W6_PHYRMPoly [ADP-ribose] polymerase. (601 aa)
H3H4R1_PHYRMPoly [ADP-ribose] polymerase. (493 aa)
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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