(23 nodes) E3 ubiquitin ligases ubiquitinate target proteins network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	H3G8T9_PHYRM	Ubiquitin-like domain-containing protein. (164 aa)
	H3G7S2_PHYRM	Uncharacterized protein. (75 aa)
	H3G9Z2_PHYRM	Histone H2B; Belongs to the histone H2B family. (115 aa)
	H3GA01_PHYRM	Histone H2B; Belongs to the histone H2B family. (117 aa)
	H3GEI9_PHYRM	Guanylate cyclase domain-containing protein. (1352 aa)
	H3GGI0_PHYRM	Uncharacterized protein. (909 aa)
	H3GID2_PHYRM	Uncharacterized protein. (924 aa)
	H3GJ50_PHYRM	Uncharacterized protein. (478 aa)
	H3GJ62_PHYRM	Uncharacterized protein. (1164 aa)
	H3GJ63_PHYRM	Uncharacterized protein. (1061 aa)
	H3GKA5_PHYRM	Plus3 domain-containing protein. (756 aa)
	H3GSZ1_PHYRM	WW domain-containing protein. (588 aa)
	H3GTW3_PHYRM	Uncharacterized protein. (488 aa)
	H3GWB1_PHYRM	WW domain-containing protein. (450 aa)
	H3GYB4_PHYRM	Uncharacterized protein. (550 aa)
	H3GZG9_PHYRM	Uncharacterized protein. (686 aa)
	H3GZK0_PHYRM	Uncharacterized protein. (464 aa)
	H3H412_PHYRM	WW domain-containing protein. (253 aa)
	H3H420_PHYRM	Pex2_Pex12 domain-containing protein. (324 aa)
	H3H6K3_PHYRM	WW domain-containing protein. (299 aa)
	H3HB50_PHYRM	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (371 aa)
	H3HD68_PHYRM	Uncharacterized protein. (243 aa)
	H3HDT1_PHYRM	Uncharacterized protein. (208 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G7S2_PHYRM	H3G8T9_PHYRM	H3G7S2	H3G8T9	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.671
H3G7S2_PHYRM	H3G9Z2_PHYRM	H3G7S2	H3G9Z2	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.468
H3G7S2_PHYRM	H3GA01_PHYRM	H3G7S2	H3GA01	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.468
H3G7S2_PHYRM	H3GTW3_PHYRM	H3G7S2	H3GTW3	Uncharacterized protein.	Uncharacterized protein.	0.761
H3G7S2_PHYRM	H3HDT1_PHYRM	H3G7S2	H3HDT1	Uncharacterized protein.	Uncharacterized protein.	0.672
H3G8T9_PHYRM	H3G7S2_PHYRM	H3G8T9	H3G7S2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.671
H3G8T9_PHYRM	H3G9Z2_PHYRM	H3G8T9	H3G9Z2	Ubiquitin-like domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.883
H3G8T9_PHYRM	H3GA01_PHYRM	H3G8T9	H3GA01	Ubiquitin-like domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.883
H3G8T9_PHYRM	H3GEI9_PHYRM	H3G8T9	H3GEI9	Ubiquitin-like domain-containing protein.	Guanylate cyclase domain-containing protein.	0.713
H3G8T9_PHYRM	H3GGI0_PHYRM	H3G8T9	H3GGI0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.671
H3G8T9_PHYRM	H3GID2_PHYRM	H3G8T9	H3GID2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.561
H3G8T9_PHYRM	H3GJ62_PHYRM	H3G8T9	H3GJ62	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.700
H3G8T9_PHYRM	H3GJ63_PHYRM	H3G8T9	H3GJ63	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.700
H3G8T9_PHYRM	H3GSZ1_PHYRM	H3G8T9	H3GSZ1	Ubiquitin-like domain-containing protein.	WW domain-containing protein.	0.561
H3G8T9_PHYRM	H3GTW3_PHYRM	H3G8T9	H3GTW3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.963
H3G8T9_PHYRM	H3GWB1_PHYRM	H3G8T9	H3GWB1	Ubiquitin-like domain-containing protein.	WW domain-containing protein.	0.561
H3G8T9_PHYRM	H3GYB4_PHYRM	H3G8T9	H3GYB4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.561
H3G8T9_PHYRM	H3GZG9_PHYRM	H3G8T9	H3GZG9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.561
H3G8T9_PHYRM	H3H412_PHYRM	H3G8T9	H3H412	Ubiquitin-like domain-containing protein.	WW domain-containing protein.	0.561
H3G8T9_PHYRM	H3H420_PHYRM	H3G8T9	H3H420	Ubiquitin-like domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.678

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