(18 nodes) Nucleotide biosynthesis network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	H3G4X3_PHYRM	AIRC domain-containing protein. (204 aa)
	H3G9Y9_PHYRM	Amidophosphoribosyltransferase. (505 aa)
	H3G9D6_PHYRM	Glutamine amidotransferase type-1 domain-containing protein. (1366 aa)
	H3G8H8_PHYRM	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (480 aa)
	H3G863_PHYRM	MGS domain-containing protein. (616 aa)
	H3G7E1_PHYRM	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. (409 aa)
	H3G5G5_PHYRM	OMPdecase domain-containing protein. (428 aa)
	H3HE26_PHYRM	Uncharacterized protein. (877 aa)
	H3H6W0_PHYRM	Uncharacterized protein. (441 aa)
	H3G5G0_PHYRM	ATP-grasp domain-containing protein. (578 aa)
	H3H3C1_PHYRM	ATP-grasp domain-containing protein. (1146 aa)
	H3H2H6_PHYRM	DHO_dh domain-containing protein. (101 aa)
	H3GV61_PHYRM	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. (565 aa)
	H3GNW5_PHYRM	Uncharacterized protein. (754 aa)
	H3GIF4_PHYRM	SAICAR_synt domain-containing protein. (341 aa)
	H3GDX3_PHYRM	Uncharacterized protein. (700 aa)
	H3GAQ0_PHYRM	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (359 aa)
	H3GA45_PHYRM	Uncharacterized protein. (528 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G4X3_PHYRM	H3G5G5_PHYRM	H3G4X3	H3G5G5	AIRC domain-containing protein.	OMPdecase domain-containing protein.	0.456
H3G4X3_PHYRM	H3G7E1_PHYRM	H3G4X3	H3G7E1	AIRC domain-containing protein.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.825
H3G4X3_PHYRM	H3G863_PHYRM	H3G4X3	H3G863	AIRC domain-containing protein.	MGS domain-containing protein.	0.930
H3G4X3_PHYRM	H3G8H8_PHYRM	H3G4X3	H3G8H8	AIRC domain-containing protein.	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.950
H3G4X3_PHYRM	H3G9D6_PHYRM	H3G4X3	H3G9D6	AIRC domain-containing protein.	Glutamine amidotransferase type-1 domain-containing protein.	0.853
H3G4X3_PHYRM	H3G9Y9_PHYRM	H3G4X3	H3G9Y9	AIRC domain-containing protein.	Amidophosphoribosyltransferase.	0.940
H3G4X3_PHYRM	H3GA45_PHYRM	H3G4X3	H3GA45	AIRC domain-containing protein.	Uncharacterized protein.	0.561
H3G4X3_PHYRM	H3GDX3_PHYRM	H3G4X3	H3GDX3	AIRC domain-containing protein.	Uncharacterized protein.	0.853
H3G4X3_PHYRM	H3GNW5_PHYRM	H3G4X3	H3GNW5	AIRC domain-containing protein.	Uncharacterized protein.	0.853
H3G4X3_PHYRM	H3GV61_PHYRM	H3G4X3	H3GV61	AIRC domain-containing protein.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.825
H3G4X3_PHYRM	H3H3C1_PHYRM	H3G4X3	H3H3C1	AIRC domain-containing protein.	ATP-grasp domain-containing protein.	0.996
H3G4X3_PHYRM	H3H6W0_PHYRM	H3G4X3	H3H6W0	AIRC domain-containing protein.	Uncharacterized protein.	0.853
H3G5G0_PHYRM	H3G5G5_PHYRM	H3G5G0	H3G5G5	ATP-grasp domain-containing protein.	OMPdecase domain-containing protein.	0.456
H3G5G0_PHYRM	H3G7E1_PHYRM	H3G5G0	H3G7E1	ATP-grasp domain-containing protein.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.825
H3G5G0_PHYRM	H3G863_PHYRM	H3G5G0	H3G863	ATP-grasp domain-containing protein.	MGS domain-containing protein.	0.930
H3G5G0_PHYRM	H3G8H8_PHYRM	H3G5G0	H3G8H8	ATP-grasp domain-containing protein.	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.950
H3G5G0_PHYRM	H3G9D6_PHYRM	H3G5G0	H3G9D6	ATP-grasp domain-containing protein.	Glutamine amidotransferase type-1 domain-containing protein.	0.853
H3G5G0_PHYRM	H3G9Y9_PHYRM	H3G5G0	H3G9Y9	ATP-grasp domain-containing protein.	Amidophosphoribosyltransferase.	0.951
H3G5G0_PHYRM	H3GA45_PHYRM	H3G5G0	H3GA45	ATP-grasp domain-containing protein.	Uncharacterized protein.	0.561
H3G5G0_PHYRM	H3GDX3_PHYRM	H3G5G0	H3GDX3	ATP-grasp domain-containing protein.	Uncharacterized protein.	0.853

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